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Information for unigene UN83911

FASTA Sequence
Unigene ID: UN83911Length: 616 SSR 
TGTGGGGATGATGATATTCGGGGCAAGTGAAGTGAGCAGGAACGTGGATCTGGGAGACGAGACGACGACCATGATGTGCAAGTTTG
TAGTGAGAGCCTCAGAAGCGTCAATCACAAAGCAAATAGAGTCAGATGTGCAGGGATGGTGCGATGATCTAACGGACGGGGGAGTT
GAGTATATGCCAGAGGATGAAGTGAAAGCAACAGCGGCTGAGAAACTAAAAATCTCAATGGAGAGAATAGCTTTGTTAAAGGCGGC
TCAGCCGAAGAAGACTCCAAAGACGCAGGAAGAAAACGAAAGCGAAGAAGAAGATGACGATGAAGAAGAAGATGATGAAGAGAAAG
AGAAGAAGGAAAAGGAGAAAGAAGAGGAGAAGAAGAAGAAGAAAGAAAAGGAAAAGGGAACACTATCTAAGCTGACAGCAGAAGAA
ACAGAGCACATGGCGCTCCAGGCGGCAGTGCTCCAAGAATGGCACATGTTGTGCAAAGATAGAAAGTTAACTAAAAACAACTAAGA
TTTGTATTCATTCTTTTTGTGTGTTTGAAGATGTGTTTGTTGTAAACATGGATGTTTATCTTTTGCTTTCATGTCTGCTATTTTGT
ATAACATCCAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884260 hypothetical protein ARALYDRAFT_477337 [Arabidopsis lyrata subsp. lyrata]7652e-079
NP_186827 TPLATE protein [Arabidopsis thaliana]7624e-079
AAF01560 unknown protein [Arabidopsis thaliana]7624e-079
XP_002509557 conserved hypothetical protein [Ricinus communis]6065e-061
XP_002298604 predicted protein [Populus trichocarpa]6003e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q8I5D2 101 kDa malaria antigen1474e-009
Q01538 Myelin transcription factor 11441e-008
P22620 101 kDa malaria antigen1412e-008
A3LUT0 Nucleolar protein 581376e-008
P54696 Myosin-H heavy chain1351e-007

TrEMBL top hits (Blast detail)Scoree value
Q9S7T0 F28J7.11 protein7623e-079
B9RBM3 Putative uncharacterized protein6153e-062
B9GJC8 Predicted protein6073e-061
Q84W49 Putative uncharacterized protein At3g01780 (Fragment)5804e-058
A3C959 Putative uncharacterized protein4325e-041

Arabidopsis top hits (Blast detail)Scoree value
AT3G01780.1 TPLATE; binding7632e-081
AT1G47300.1 F-box family protein1251e-007
AT5G25590.1 INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF630 (InterPro:IPR006868), Protein of unknown function DUF632 (InterPro:IPR006867), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52320.4); Has 31848 Blast hits to 18905 proteins in 762 species: Archae - 79; Bacteria - 761; Metazoa - 15943; Fungi - 3494; Plants - 1748; Viruses - 431; Other Eukaryotes - 9392 (source: NCBI BLink).1214e-007
AT1G29000.1 heavy-metal-associated domain-containing protein1181e-006
AT5G24880.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 195834 Blast hits to 92446 proteins in 2480 species: Archae - 1007; Bacteria - 19200; Metazoa - 85171; Fungi - 18359; Plants - 7291; Viruses - 1072; Other Eukaryotes - 63734 (source: NCBI BLink).1181e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members