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Information for unigene UN83918
| FASTA Sequence |
| Unigene ID: UN83918 | Length: 669 |
SSR | | TGGTTTACAAGGAAATTCTGGTTTACAAAAACAAATCAGAATAAGAAAATAAAGTAAACCTAGAAAAAAAAAAATTAAACCTAAGG
TTCAATCTTGAATCTTCAATCTTCAATCTTCAAGCTTCAAGCTTCAAGCCTCCTCCTCTCTGGATTTCACTGATCTTCTTCTTCCT
CTTGCTTCCAAGCCTCAGATAATTTGCAAGACCTTCAAGTCCGAGCTCCATTAGCTTCAAGTAACCACCAGGTTGAAGCAATTCAC
CAACGATTCTGTCTTGCTCAGACAAGTCTCTTTCTATAACGTGCACTCTTCGTCCTTCCTGTAACCACACAAGAAAGAAACTTACG
TCTTGAACACACACATACACAGAAGAAAAAACGAAAACAGAGCATTACCTCTGCGTCCCCAGGTGTAGCAACGACCTTCAAAATCC
AACGCCACACAATGACACGAAGCACAACCTAGAGGGAGAGTAATCTCAGTTTCTTATCCACTCGGAGTTCCGCGACAAAATCCATA
TTTGTAAAGGAAAGACCTTGACAGATTCATTGACGGACTCTAGATGTCGAATCTCCTCATATTCGTAAAGGTGACAAGCACGTCGG
TGACCATAGTGGTGGTGAAGAGTGCGACGAATCGAAGGTAGTGGTGGTGGTGGTGGTGGTGACGACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880464 predicted protein [Arabidopsis lyrata subsp. lyrata] | 183 | 7e-012 |
| BAJ33967 unnamed protein product [Thellungiella halophila] | 183 | 7e-012 |
| BAD15330 squalene epoxidase [Panax ginseng] | 181 | 1e-011 |
| ABE73759 squalene epoxidase [Panax notoginseng] | 181 | 1e-011 |
| ACJ24907 squalene epoxidase [Panax ginseng] | 181 | 1e-011 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48651 Squalene monooxygenase | 180 | 7e-013 |
| P52019 Squalene monooxygenase | 138 | 6e-008 |
| O65404 Squalene monooxygenase 1,1 | 135 | 1e-007 |
| Q14534 Squalene monooxygenase | 129 | 6e-007 |
| O65402 Squalene monooxygenase 1,2 | 127 | 1e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7TWW5 Squalene epoxidase | 181 | 8e-012 |
| D3K179 Squalene epoxidase | 181 | 8e-012 |
| Q1KSF9 Squalene epoxidase | 181 | 8e-012 |
| Q75W20 Squalene epoxidase | 181 | 8e-012 |
| O81000 Putative squalene epoxidase | 179 | 1e-011 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22830.1 SQE2 (squalene epoxidase 2); FAD binding / oxidoreductase/ squalene monooxygenase | 179 | 9e-014 |
| AT4G37760.1 SQE3 (squalene epoxidase 3); squalene monooxygenase | 174 | 4e-013 |
| AT1G58440.1 XF1; squalene monooxygenase | 165 | 4e-012 |
| AT5G24150.1 SQP1; squalene monooxygenase | 135 | 1e-008 |
| AT5G24150.2 SQP1; squalene monooxygenase | 135 | 1e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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