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Information for unigene UN83928

FASTA Sequence
Unigene ID: UN83928Length: 693 SSR 
GTCAGATTGCTTACAGACATCTTTGAGATCGATGATGATCATTCTGAGGAAAGAGGAGATGAGACATTTAAACCTTTCCACTTGCT
CAATGAACTGAGCGATCTCCTTATGCTTCCAAAAGAAATGCTTGTGGACAGTTCCACCAGAGATGAGGTCTGCCCATCAATTGGTT
TGAGTTTGATAAAAAGGATATTATGCAACTTCACCCCAGATGAGTTCTGCCCATACCCTGTCCCAGGAACTGTTCTTGAGGAGCTC
AACGCTCAGAGCATAATTGAGAGAAGAAGCTCATCAGGAGATGCAACTAGAGACTTTCCCAGACAAGTCGATCCGGTTGAGTACTG
TCTTCCTTCTAGTGCACAGTTGACAGATATGGTGGCAGAGTTCAGTGACAACCTTAAGGTTTCCATGATACAAAACATAGTATACA
ACAACAACGAAGAGGTGGAAACATCAAGATCTCCTCCATACTACAAAATCATCAAAGGAGTTGAAGAAAAGGACAACCTTAGTTTC
TCTCCTACTAATGAAAGATACAGACTCCTTGGAGAAATCTAAAACCAAAGCTCATAAGATGTACATTCATACATAACTCTCTCTCT
CTTTCTCTCTCTCACACACACACACACTCCAGAAACAAAACATACAATCTTGCGCCACTTTTCTTGATTTTTATAGTAAAAAACTA
GAGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871241 hypothetical protein ARALYDRAFT_487508 [Arabidopsis lyrata subsp. lyrata]7464e-077
BAB11151 unnamed protein product [Arabidopsis thaliana]7133e-073
NP_196310 uncharacterized protein [Arabidopsis thaliana]7133e-073
XP_002282962 PREDICTED: hypothetical protein [Vitis vinifera]3853e-035
CBI29891 unnamed protein product [Vitis vinifera]3853e-035

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q0WQA5 Putative uncharacterized protein At5g069307132e-073
Q9FL52 Gb|AAD23715.17132e-073
B9SL81 Putative uncharacterized protein3833e-035
B9II42 Predicted protein (Fragment)3726e-034
Q8H0H5 Putative uncharacterized protein A203663e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G06930.1 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3144 Blast hits to 1363 proteins in 247 species: Archae - 2; Bacteria - 721; Metazoa - 835; Fungi - 297; Plants - 80; Viruses - 10; Other Eukaryotes - 1199 (source: NCBI BLink).7131e-075
AT3G57780.1 EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 3024 Blast hits to 2177 proteins in 255 species: Archae - 2; Bacteria - 181; Metazoa - 988; Fungi - 289; Plants - 172; Viruses - 72; Other Eukaryotes - 1320 (source: NCBI BLink).3635e-035
AT2G42320.1 nucleolar protein gar2-related3554e-034
AT2G42320.2 nucleolar protein gar2-related3554e-034
AT3G01810.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384 proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi - 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI BLink).2757e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  100%

Unigene Members