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Information for unigene UN83956

FASTA Sequence
Unigene ID: UN83956Length: 878 SSR 
CTCTCTCCCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCCTCTCTTTGTTCAGACGACGATTTGCTGAAATTACAATCGCCTGATAT
TCCGTTGATCGCCAGATTCTCTACGTCGGAAAGATCGATCTAGATACGCCATGAATCCTGAATATGACTATCTGTTCAAGCTTTTG
CTTATCGGTGATTCTGGTGTTGGAAAATCCTGCTTGCTTCTAAGATTTGCTGATGATTCTTACCTGGACAGCTACATCAGTACCAT
TGGTGTTGACTTTAAAATCCGCACAGTTGAACAGGACGGAAAGACAATCAAACTCCAGATCTGGGACACAGCAGGCCAAGAGCGTT
TCAGGACAATCACAAGCAGCTACTACAGAGGAGCTCATGGCATCATTGTCACCTACGATGTCACTGACCAAGAGAGCTTCAACAAC
GTCAAGCAATGGCTGAATGAAATCGACCGTTACGCCAGTGAGAATGTGAACAAGCTACTGGTTGGGAACAAAAACGATCTCACTTC
ACAGAAAGTTGTCTCCACTGAGACAGCTCAGGTAAAATAAACAAAACCAACTGGTCTCTTTCGCTGTAAACCTTGTTGAAACATAT
AGAATAACATTGTTATCTTCTACTACTACTACTACTACTACAGGCTTTTGCAGATGAACTTGGGATCCCTTTCTTGGAAACAAGTG
CTAAAAATGCAACCAATGTTGAAGAAGCCTTCATGGCCATGACTGCTGCTATCAAGACCAGAATGGCTAGCCAACCGTCTGGAGGT
GCCAAGCCACCGACTGTCCAGATTCGCGGACAGCCAGTGAACCAGCAATCAGGCTGCTGCTCATCTTGATTCCCCATTAGTCTCAA
CAAGTCTCTTTGGATCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD64935 GTP-binding protein, putative [Brassica oleracea]7072e-072
NP_568678 RAB GTPase-1A [Arabidopsis thaliana]6964e-071
ABD65068 GTP-binding protein, putative [Brassica oleracea]6947e-071
NP_193486 RAB GTPase homolog 1C [Arabidopsis thaliana]6874e-070
AAL31108 AT4g17530/dl4800c [Arabidopsis thaliana]6874e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q05737 GTP-binding protein YPTM26782e-070
P40392 Ras-related protein RIC16522e-067
Q01890 Ras-like GTP-binding protein YPT16451e-066
Q39571 GTP-binding protein YPTC16442e-066
P28188 Ras-related protein RABD2A6423e-066

TrEMBL top hits (Blast detail)Scoree value
Q2A9V7 GTP-binding protein, putative7071e-072
Q9FPJ4 AT5g472006963e-071
Q2A9H3 GTP-binding protein, putative6945e-071
Q8W4S8 AT4g17530/dl4800c6873e-070
Q9SEH3 AT4g17530/dl4800c6873e-070

Arabidopsis top hits (Blast detail)Scoree value
AT5G47200.1 ATRAB1A; GTP binding6962e-073
AT4G17530.1 ATRAB1C; GTP binding6872e-072
AT1G02130.1 ARA-5 (ARABIDOPSIS RAS 5); GTP binding6423e-067
AT3G11730.1 ATFP8; GTP binding / GTP-dependent protein binding / myosin XI tail binding6145e-064
AT5G03520.1 ATRAB8C; GTP binding5034e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

Unigene Members