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Information for unigene UN84004

FASTA Sequence
Unigene ID: UN84004Length: 704 SSR 
CCCCTTCTCGTTCGACCTTCCTTCGTCTCTCAAGTTTCTCTTTTTCCCCTTTTAAATCAGAGATTCCTAATAATCCAATATCCATT
TCTCAGTCTTTCTCTTCCACCATTCTCTTTGATTACTGTAGTTCGTTGGATGAAGAACAGAGAGAGTGAAAGTTTCTGTCTTTAAT
GGGCAATTCATGCCGTCGATCTTCCAAAGACAAAATCTACCAATCCAATAACACTAAGCCTGAAGATCACTCCAAATCCTCCTCTA
CCACCAACGTTGTTTCCTCAGATCGCTCTGTTCCCACTTCAGAACAATCCTCCAAAGAAGCAGCTCACAACAACAACAACAAGGAC
AAGAATCCAGCTCTCATTATCCCTTCGAGAGAACCAATCATGAGACGCAACATGGACAACCAAGCTTACTACGTCCTCGGTCACAA
GACTCCCAACATCCGCGACCTCTACACGCTGAGCCGCAAGCTGGGACAAGGCCAGTTCGGGACGACTTACCTCTGCACGGAGCTCG
CCACGGGGGTTGACTACGCTTGCAAGTCGATATCCAAGAGGAAGCTGATCTCCAAGGAAGACGTCGAGGATGTAAGGAGGGAGATT
CAGATCATGCACCACTTAGCTGGTCACGGCAACATCGTGACCATCAAAGGAGCTTACGAGGACTCTCTGTACGTCCACATTGTGAT
GGAGCTTTGCGCTGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884049 calcium-dependent protein kinase 6 [Arabidopsis lyrata subsp. lyrata]7374e-076
NP_195257 calmodulin-domain protein kinase 5 [Arabidopsis thaliana]7152e-073
XP_002869095 calcium dependent kinase 5 [Arabidopsis lyrata subsp. lyrata]6693e-068
NP_565411 Calcium-dependent protein kinase family protein [Arabidopsis thaliana]6561e-066
AAZ32751 calcium dependent kinase 5 [Brassica oleracea var. alboglabra]6505e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q38871 Calcium-dependent protein kinase 57158e-075
Q38872 Calcium-dependent protein kinase 66565e-068
A5A7I7 Calcium-dependent protein kinase 45607e-057
A5A7I8 Calcium-dependent protein kinase 55042e-050
Q9SZM3 Calcium-dependent protein kinase 264504e-044

TrEMBL top hits (Blast detail)Scoree value
Q460M3 Calcium dependent kinase 5 (Fragment)6504e-066
Q460M2 Putative calcium dependent kinase 6 (Fragment)6397e-065
Q460M1 Putative calcium dependent kinase 6 (Fragment)6235e-063
B9S3P2 Calcium-dependent protein kinase, putative6002e-060
B9MZ11 Calcium dependent protein kinase 65984e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G35310.1 CPK5 (calmodulin-domain protein kinase 5); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase7157e-076
AT2G17290.1 CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase6565e-069
AT3G10660.1 CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calmodulin-dependent protein kinase/ kinase/ protein serine/threonine kinase3861e-037
AT5G04870.1 CPK1 (CALCIUM DEPENDENT PROTEIN KINASE 1); calmodulin-dependent protein kinase/ kinase3724e-036
AT2G38910.1 CPK20; ATP binding / calcium ion binding / calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase3662e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

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