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Information for unigene UN84101
| FASTA Sequence |
| Unigene ID: UN84101 | Length: 880 |
SSR | | TAGTCTCTCTGGGTTTTGTTTTGATGATGATGATGGATGATGATAAAACTCCCCAAGATATTTCTCCAGCTATAATGGATGCTGAG
ATGACAGGAGAGATATCACACAGCCAACACGAAAGATGGAGATGCCTTGTCTTAGATATAGAGTTGAGAGCACAACAAGAAGACGG
CTCCTCCACTCCTCCTCATAGCTCTGTCTCCAAAAGGTTCAGCTTCTCTCCCATGCCAAGTCCTAGAATCGGTCCGAGAAGAGCCA
GTCTCAAGAACGTCTTCAACTTCAGAAACCGGAACAACAACAACAACAACAATGCAGCAGATATTGAGGAAGGTGCCGCTTTGGTG
TCTAGCATCCCAAGAACATGGTCTCTCACCAATCTCTTAACACTCCGAAGATCCAACAAGACAGAGTCTTTACCGGTAACCCCTTT
GGTCCACTCGAATCCTGAGTCAATGCACGGTAGAAGCTATGCCGTCGATGATGATGATGATGATGATGATGATCAAGCTATTACTT
CCATGGCCATAGAGCATACACTGCCTATTCGCCGTACACGCTCTGTCCCAACGCTCATCGACAACAACAGAGATGGAAATGCCAAA
CCCTTAGGGCTTCTCCGCGTGATTCCCACTCCATCTCGGCGGTTGGATAACGAGAGTAGACTCGATGGAGGAGAAGACGTTCCGGA
AGAGGAAGCTGTGTGCAGGATCTGTATGGTCGAGTTGGGAGAAGACTCGGAAGCTTTCAAGATGGAGTGCATGTGCAAAGGTGAAC
TAGCTCTTGCTCACAGAGCCTGCACCATCAAATGGTTCACTATCAAAGGGAACATTACATGTGATGTGTGCAAACAAGTTGTGAGA
AATCTCCCCGTGACGCTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873078 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 753 | 1e-077 |
| NP_568111 RING/U-box domain-containing protein [Arabidopsis thaliana] | 748 | 4e-077 |
| BAB08378 unnamed protein product [Arabidopsis thaliana] | 744 | 1e-076 |
| CAB86085 putative protein [Arabidopsis thaliana] | 744 | 1e-076 |
| NP_001190212 RING/U-box domain-containing protein [Arabidopsis thaliana] | 744 | 1e-076 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q940Q0 AT5g03180/F15A17_210 | 748 | 2e-077 |
| Q9FYM9 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 | 744 | 7e-077 |
| Q9LYW7 Putative uncharacterized protein F15A17_210 | 744 | 7e-077 |
| Q940P1 At3g09760/F8A24.19 | 586 | 2e-058 |
| Q9SF83 F8A24.19 protein (Fragment) | 586 | 2e-058 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G03180.1 zinc finger (C3HC4-type RING finger) family protein | 748 | 1e-079 |
| AT3G09760.1 zinc finger (C3HC4-type RING finger) family protein | 586 | 9e-061 |
| AT5G60580.1 zinc finger (C3HC4-type RING finger) family protein | 378 | 1e-036 |
| AT5G60580.2 zinc finger (C3HC4-type RING finger) family protein | 378 | 1e-036 |
| AT5G60580.3 zinc finger (C3HC4-type RING finger) family protein | 378 | 1e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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