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Information for unigene UN84229

FASTA Sequence
Unigene ID: UN84229Length: 728 SSR 
CGGCACGAGGAAGACCCGGGGAGGATCTCTCGAGACGCAATGCGTCCTTAACATCTAGCCCTGTCGCCAAAAGAGTCAACTTTTCT
CCAATGTCGAGCCCTAGAATCGGCCAGCGTGGCGCATCACTCAGTCCTTCCTCTTCAAGAAACAAACCTAATAATAATAATAATAA
TAATAATAATAGCTTGAAGAATCTAGTCCCCAAGTTGAGTTTCAAAAACAGGAACAGCGATATCGAGGCCTTTGGGGCAGCGTCCT
CCTCTCCTTCTGGCAGGGACAGGTCCACGTGGACTCTCGGTAATATTCTAACTCCGAGGTTGAAGAAAACTGAGTCCTTGCCTGTA
ACCCCTATTGCTCACTCGAATCCTGGGTCCACGCATGGGAGATATGTGGTTGATCCGGTTACTTCCATGAAGAAAGGCCCTCCACT
GCCTATTCACCGATCACGCTCCGTTCCAGCGTTCAACAAAGATGGAAGTCTAAGACAAGCAGGTGTTTTCAGGGTGATTCCTACTC
CAAACATGACGCCAGCAAGAAATAATAATATTAAACTTAACGACACGGATGTTGATGGAGGAGAAGATGTTCCTGAAGAAGAAGCT
GTGTGCAGAATCTGCATGGTGGAATTGGGAGAAGACTCAGATGCCTTCAAGATGGAATGTATGTGTAGAGGTGAACTAGCTCTAGC
ACACAAAGAATGTACAATCAAATGGTTCACCATTAAAGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF23259 unknown protein, 3' partial [Arabidopsis thaliana]9742e-103
NP_566355 RING/U-box domain-containing protein [Arabidopsis thaliana]9742e-103
XP_002884753 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]9151e-096
XP_002873078 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]6372e-064
NP_568111 RING/U-box domain-containing protein [Arabidopsis thaliana]6174e-062

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q940P1 At3g09760/F8A24.199741e-103
Q9SF83 F8A24.19 protein (Fragment)9741e-103
Q940Q0 AT5g03180/F15A17_2106173e-062
A5B9W8 Putative uncharacterized protein4425e-042
Q3E882 Putative uncharacterized protein At5g60580.24166e-039

Arabidopsis top hits (Blast detail)Scoree value
AT3G09760.1 zinc finger (C3HC4-type RING finger) family protein9747e-106
AT5G03180.1 zinc finger (C3HC4-type RING finger) family protein6172e-064
AT5G60580.1 zinc finger (C3HC4-type RING finger) family protein4164e-041
AT5G60580.2 zinc finger (C3HC4-type RING finger) family protein4164e-041
AT5G60580.3 zinc finger (C3HC4-type RING finger) family protein4164e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

Unigene Members