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Information for unigene UN84375

FASTA Sequence
Unigene ID: UN84375Length: 831 SSR 
TGCCAGAGCACGATCTCGGAGAGTGGGTCAGAGGGAGTTTCTCAGCAGGATTTACAGTCAAACAGTAACATGGTCTTGGGAGCAGG
ACGGCAGCTGGCCAAGTTTATGGAATTACAGTCGCTGAATGATCTTGGCTATCCAAAAAGATATATCAGAACTCTACAGATATCTG
AAGTTGTCAAGAGCATGAAGGATCTGATGATTTTCACTGGCGAGCACAAAGTTGGCCCTATTGATGGGTTGAAACGGCTTTTAGAA
CAGACAGCGACGGTAAAGCTCCAGAGACAGCAGAAAATGCAGGAGATGGAGCATTTGGGGAATAGTGGAGCTATGAACGGGTCAGC
TCAAGCTCAGATGGCGTTGACTCAAGGAACGATGAACGGCCTAATTGGCAACAGCAACAGCAACAACTCCAACGCCAACAATCACC
ATCAACTTGTTGGTCGTGGAGCTATGAATGGCTCGGCTCAAGCTGCAGCAGCTTTGACCAACTACCAAAGCATGCTTATGAGGCAA
AACGCTATGAATAACCCAAACTCAACTACGGTGGTCAAACAAGAGGGGTTCTCTAGTAGTCAGAACCCAACCCAGAGTCCATCTTC
TTCCTCCCATCAGAGGCAGAACTTAGCAACAGTTGGATTCCCCAGCTCTCCTCAAATGCAACAGCAACAGCAGCAGCAGCAGCGCA
CCATGAATGGACCACCTCCCAACACGCTTCATCAGCAGAATCATCCTCATCATTTGCAACCACCACATTCACATGGGAACAACAAC
CAGGAGCAGCAGATGCTTAATCAGCTGTTACAGGAGATATCTGAAAACGGACCAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_680741 protein SEUSS-like 3 [Arabidopsis thaliana]10163e-108
XP_002867606 hypothetical protein ARALYDRAFT_492274 [Arabidopsis lyrata subsp. lyrata]6767e-069
CAA18174 putative protein [Arabidopsis thaliana]6632e-067
NP_194282 protein SEUSS-like 1 [Arabidopsis thaliana]6632e-067
CAB81362 putative protein [Arabidopsis thaliana]6571e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q8W234 Transcriptional corepressor SEUSS2534e-021
P34103 Protein kinase 4 (Fragment)1423e-008
Q54TE3 GATA zinc finger domain-containing protein 101272e-006

TrEMBL top hits (Blast detail)Scoree value
Q3E7E5 Putative uncharacterized protein At4g25515.110162e-108
O65609 At4g255206632e-067
Q0WVM7 Putative uncharacterized protein At4g255206632e-067
Q9M0K8 Putative uncharacterized protein AT4g25520 (Fragment)6578e-067
B9R9G2 Transcriptional corepressor SEUSS, putative6211e-062

Arabidopsis top hits (Blast detail)Scoree value
AT4G25515.1 SLK3 (SEUSS-LIKE 3); transcription regulator10161e-110
AT4G25520.1 SLK1 (SEUSS-LIKE 1); transcription regulator6631e-069
AT5G62090.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: SLK1 (SEUSS-LIKE 1); transcription regulator (TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742 species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752; Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI BLink).4721e-047
AT5G62090.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: SLK1 (SEUSS-LIKE 1); transcription regulator (TAIR:AT4G25520.1); Has 38202 Blast hits to 15459 proteins in 742 species: Archae - 6; Bacteria - 1392; Metazoa - 14682; Fungi - 3752; Plants - 2341; Viruses - 407; Other Eukaryotes - 15622 (source: NCBI BLink).4721e-047
AT1G43850.1 SEU (seuss); DNA binding / protein binding / protein heterodimerization/ transcription cofactor2533e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

Unigene Members