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Information for unigene UN84397
| FASTA Sequence |
| Unigene ID: UN84397 | Length: 806 |
SSR | | AACTTATTTTCTCCAACTTACAAGCTTCATGGTCTAATCAATCACTCCTTAGATTCCTTGCTTCCATCAATTTGTTACTAGTATAG
TTCCGTTCAAATTGTTTTGTACGTATACACACAAGCGTCTTGTTCTTTAGGTTTGTGTGTGAGTACATAGTTTGTTGCAAACGTGG
ATCGAATTAATGTACGGAAAGGGACCGGTTCCACCGGAAACGTCAGCGGAGGAGTATCCATCTTGGAACGAGTCTGATTTCACTGC
TATGATGTCCTCTTTCAGCCATGTCATCGAGTATCCGGCAGCGGACCAGCCGGTCAAACAAGAGCTTGATAAGTCGGATCAACTAC
AACAAGACCAAGACCAACCAAGAAGAAAACACTATAGAGGCGTACGGCAGCGACCATGGGGCAAATGGGCGGCCGAGATCCGCGAC
CCAAAGAAAGCAGCCCGTGTATGGCTCGGGACTTTTCAGACAGCAGAGGAGGCTGCTTTAGCCTACGACCGAGCCGCCCTCAAATT
CAAAGGCACCAAGGCTAAGCTCAACTTCCCTGAACGCGTCCAAGGTCCTTCGACCACAAGCTACGTCGCATCTCAACCCGGCAGTG
ATCATGCCCCAATAGGTGGTAATGAATTTATGAACTCCCCTCCTCCTCTGCTTGGTCCATCTACTACTACTACTACTTCGTGGCCA
ACGGATTATAATCAGGACATACTTCAATATGCTCAGTTGCTTACGAGTAACAATGACGTTGATTTGTCGTACTACACGTCGAGTCT
TTTCAGTAGTCAGCAACAGCCTTTCTCAACGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34121 unnamed protein product [Thellungiella halophila] | 840 | 7e-088 |
| NP_196837 ethylene-responsive transcription factor ERF113 [Arabidopsis thaliana] | 718 | 9e-074 |
| XP_002871562 hypothetical protein ARALYDRAFT_488151 [Arabidopsis lyrata subsp. lyrata] | 717 | 1e-073 |
| XP_002512669 AP2 domain transcription factor RAP2.3, putative [Ricinus communis] | 470 | 5e-045 |
| XP_002304640 AP2/ERF domain-containing transcription factor [Populus trichocarpa] | 455 | 3e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYU3 Ethylene-responsive transcription factor ERF113 | 718 | 4e-075 |
| Q9FH54 Ethylene-responsive transcription factor ERF114 | 350 | 2e-032 |
| Q9LY29 Ethylene-responsive transcription factor ERF115 | 337 | 6e-031 |
| P93007 Ethylene-responsive transcription factor ERF112 | 330 | 4e-030 |
| Q70II3 Ethylene-responsive transcription factor ERF110 | 297 | 3e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RG00 AP2 domain transcription factor RAP2.3, putative | 470 | 4e-045 |
| B9GZ21 AP2/ERF domain-containing transcription factor | 455 | 2e-043 |
| C1KH72 RAP2-like protein | 452 | 5e-043 |
| D5L110 AP2 domain class transcription factor | 409 | 4e-038 |
| B9RGX0 DNA binding protein, putative | 391 | 5e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G13330.1 Rap2.6L (related to AP2 6L); DNA binding / transcription factor | 718 | 4e-076 |
| AT5G61890.1 AP2 domain-containing transcription factor family protein | 350 | 2e-033 |
| AT5G07310.1 AP2 domain-containing transcription factor, putative | 337 | 6e-032 |
| AT2G33710.1 AP2 domain-containing transcription factor family protein | 330 | 4e-031 |
| AT5G50080.1 DNA binding / transcription factor | 297 | 3e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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