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Information for unigene UN84436
| FASTA Sequence |
| Unigene ID: UN84436 | Length: 767 |
SSR | | AACTTAGTGGGGTTCTCTGGAAAATATTCGAATTTTTTGAAAAGATTTTTGACTGATGATGACACTTAACTCACTCTCTCCAGCTG
AATCCATCTCTCTTTCTTTCTTGGATACTTCCAGGTTCAACCAAACCCCCAAACTTCCAGGTTTCTCTTCCCCAAATCTCTCTCTC
TCTCTCTTGGATTAAAAATAAAAGCTTCAAACTTTCAATATTTTTTCGTAATGCTCTTTTGAGTTTTGACATCTGGGTTTCTTTGA
TCTGTGACATATGAGACCTGATTCTTTGTAAATTCTTCGATTTGAATTGAGACACTAATCGTGTGATTACTTCAGTACCTGAGTGT
ATTAAAGTTCACATCTTTGGGACTTGTTGTCACAGGTGGGTTTAGTTTGAGGAAGAAGAGGACTCAAGGGAGAGGTTTTGTTGGAA
AAGGAGTCAAGTGTTCAGTGAAAGTGCAGCAGCAGCAGCAACAACCTCCTCCTCCTCCAGCGTGGCCTGGGAGAGCTGTTCCCGAG
CCTCCTCGTCAATCTTGGGATGGACCTAAACCCATCTCCATCGTCGGTTCTACTGGTTCTATTGGCACCCAGACCTTGGATATTGT
GGCTGAGAATCCTGACAAATTTAGAGTCGTCGCTCTAGCTGCTGGCTCTAATGTTGCTCTCCTTGCTGATCAGGTGAAGAGATTTA
AACCTGCACTGGTTGCTGTTAGAAATGAGTCATTGGTCACTGAGCTTAAAGAGGCTCTAGCCGGTTTGGACTATAAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201085 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Arabidopsis thaliana] | 566 | 4e-056 |
| XP_002866510 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Arabidopsis lyrata subsp. lyrata] | 552 | 2e-054 |
| AAK96063 1-deoxy-D-xylulose-5-phosphate reductoisomerase [Solanum lycopersicum] | 458 | 1e-043 |
| ABO38177 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Croton stellatopilosus] | 450 | 1e-042 |
| ACU24603 unknown [Glycine max] | 443 | 7e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFS9 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 566 | 2e-057 |
| Q8W250 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 430 | 1e-041 |
| Q9XES0 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic | 423 | 6e-041 |
| B0JWW6 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 235 | 4e-019 |
| B7KAT5 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 220 | 2e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q947C3 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 458 | 8e-044 |
| A4L795 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 450 | 7e-043 |
| C6TNW1 Putative uncharacterized protein | 443 | 5e-042 |
| Q8L6C5 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 442 | 6e-042 |
| Q0GYS3 1-deoxy-D-xylulose 5-phosphate reductoisomerase | 438 | 2e-041 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G62790.1 DXR (1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE); 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 566 | 2e-058 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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