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Information for unigene UN84510

FASTA Sequence
Unigene ID: UN84510Length: 833 SSR 
CTTTCTCCGCAAACTGTTTCCGAGAAAATTATTTCGATCTTGCTCCCCCATCACTCTGTTTTGATTATTGTTTTAAGCATTCTTAT
TGAGATTTGAAGATTTCTTTCGTTAGGGTTATATCTCTTGTTCCTGTGTAGTTTCGAGATCAAAGAAGAAGAAGAAGAGAGATTTG
TAATGGATAATAACAACAACAACAGAGGGAGATTTCCACCGGGTATTGGAGCTCCGGATCCTAATTTTCAGTCACGGAACCCGAAT
CCGAACCCGCCTCCTCAACAACAGTACCTTCACTCACGCACTCCGTTTCCTCAACAGTATGTTCAGTCTCGTACCCCTTTGCCTCC
ACATCAGCAGCAGCAGCAACCTGATGCTCAGCAGTACGTTCAGAGAGGTCACACACAACAAAACCCTCCTCAACAGCAGCAGTGGT
CTACACGCGCTCAGCTTCCTGGTAATCCCAGTTATGTAGATGAAGTCGAGAAGACTGTTCAATCTGAAGCTAACAACGATTCTAAT
AACCAGGACTGGAAAGCAACGTTGAAGCTCCCTCCTCGTGATAACCGTTACCAGACTGAGGATGTGACGGCTACTAAAGGAAATGA
ATTTGAGGATTACTTTTTGAAGAGGGATCTGCTGAGGGGGATCTATGAAAAGGGTTTTGAGAAGCCTTCTCCTATTCAGGAGGAAA
GCATTCCTATTGCTTTGACTGGAAGTGATATCCTCGCTAGAGCCAAAAACGGGACTGGGAAGACTGGTGCCTTCTGCATCCCTACC
CTTGAGAAGATTGACCCTGAGAAACATATCATTCAAGCTGTAATTTTAGTCCCAACCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880201 hypothetical protein ARALYDRAFT_483719 [Arabidopsis lyrata subsp. lyrata]9132e-096
NP_182105 DEAD-box ATP-dependent RNA helicase 6 [Arabidopsis thaliana]9062e-095
AAK63966 At2g45810/F4I18.21 [Arabidopsis thaliana]9008e-095
XP_002876600 hypothetical protein ARALYDRAFT_486601 [Arabidopsis lyrata subsp. lyrata]6571e-066
XP_002511831 dead box ATP-dependent RNA helicase, putative [Ricinus communis]6302e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q94BV4 DEAD-box ATP-dependent RNA helicase 69067e-097
Q9M2E0 DEAD-box ATP-dependent RNA helicase 126244e-064
Q6H7S2 DEAD-box ATP-dependent RNA helicase 86101e-062
Q8RXK6 DEAD-box ATP-dependent RNA helicase 86031e-061
Q7XMK8 DEAD-box ATP-dependent RNA helicase 65511e-055

TrEMBL top hits (Blast detail)Scoree value
B9RDP2 Dead box ATP-dependent RNA helicase, putative6301e-063
B7EKD5 Putative uncharacterized protein6102e-061
B9I8G6 Predicted protein5994e-060
B9GPZ0 Predicted protein5914e-059
A5C9D5 Putative uncharacterized protein5772e-057

Arabidopsis top hits (Blast detail)Scoree value
AT2G45810.1 DEAD/DEAH box helicase, putative9067e-098
AT3G61240.1 DEAD/DEAH box helicase, putative (RH12)6243e-065
AT3G61240.2 DEAD/DEAH box helicase, putative (RH12)6243e-065
AT4G00660.2 DEAD/DEAH box helicase, putative6039e-063
AT4G00660.1 DEAD/DEAH box helicase, putative6039e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

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