Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN84515

FASTA Sequence
Unigene ID: UN84515Length: 864 SSR 
TGCTCCGTAATTCAGAGACTGCTGTTCGGTCTTTCATGATGCTACAGCCAAGATTCCCTCATTCTAAACCAGGTGGAGGAGCTGGA
GCTGTTGGTGGTTCTCAGTCGTCTCAGGCTCCGCAGGGAGCTAATCCGGCTCCAGCTTCCTCTGGTCAACAACAACAACAACAAGC
AGTTACTTCCGTTGTTCAAGTTTCTGACTTTTACCGTGGGATCCCAAGGAAACCCACTGTTTTTCTACAGCAGACAGTTGCGAGGT
TTGAGAAGTATCTAGGCGAGTGCCGACAGTGGGTTGAGGAGCTGGAGCAGTTGCTTGCTTTGGATTCCGACAAGTTTAGTCGGCAT
GTTTCTCTTTTGGAATCTCTTCCAAAAGTCATCTCTAATGTGCATGACTTCTTTGTTCATGTCGCTGCTAAGGTAGAGAATATCCA
CCAATACATTGAATCGATGAGGACGGCGTATCTTGCTGACCAGCGGCGTAGAGGAGAATGCCATGACCCGTTTCTTGAGGCTGATC
GGAGGGAAACAGCAAAACAAGAAGCTGCTGCTAAAAGAGTCCACCCAACTCTGCATCTACCTGCTACTACAAGTACACAACCCTCA
ACCCAAGTTGCTGGATTAATTACCAGCTCAGCTACTCCTGGGACTGCAAATGCTCCACCAACATCCGCAGCCTTTCCAACACCAAA
CCCTTCTTCAGGAGCTGGCTTGTTTTTTAACACGCCTGCTTCTTCTGCACCTACGACTTCTCTCTTTGCTACACCATCTTCTGCTG
CTCCTACCTCTTCTTTGTTTGGAGCAGCAGCTACTCCAGCACAGACACCACTCTTTGGTTTCTCACCAGCTTCTGCATTTGGTTCT
GCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB16782 nucleoporin-like protein [Arabidopsis thaliana]11382e-122
NP_195430 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]11382e-122
XP_002866977 hydroxyproline-rich glycoprotein family protein [Arabidopsis lyrata subsp. lyrata]11274e-121
XP_002310761 predicted protein [Populus trichocarpa]8335e-087
XP_002265026 PREDICTED: hypothetical protein [Vitis vinifera]7852e-081

Swiss-Prot top hits (Blast detail)Scoree value
P84752 Peroxidase A (Fragments)1342e-007

TrEMBL top hits (Blast detail)Scoree value
O23173 Nucleoporin-like protein11381e-122
Q8RWH9 At4g3713011381e-122
B9HEE7 Predicted protein8333e-087
D0VEB0 Putative uncharacterized protein (Fragment)7626e-079
B9S8N7 Putative uncharacterized protein7312e-075

Arabidopsis top hits (Blast detail)Scoree value
AT4G37130.1 hydroxyproline-rich glycoprotein family protein11389e-125

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

Unigene Members