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Information for unigene UN84648

FASTA Sequence
Unigene ID: UN84648Length: 816 SSR 
GATCATCATCATCATCATCAGATCCTCAAACCCCAAACCACCACCACATCATTGACATCCCATCCTCCTCTTCTCACGATAGAATC
TCAAACGTTTTGGAGCCTCTACAACACGATAATGATGATGATGTTGAGAGACCTTCTACCACTGCTCCTCCGATGACTGTTCCTCA
GCCAGCTACAGTTTCTTCTTCCTCTTTTTCTATGAGGTCTAATCCTACTAGAAACAACCGCCGGAGGAGAAGTCCTTTGAACTCTG
GTCTTTGGATTTCAATTGAGCTGTTCCTCACTCTTGGCCAGATCGTTGCTGCTATTGTTGTGTTGTGTTTGTCTAAACACGAGCAT
CCACGCGCTCCCTTGTTTGCTTGGATCGTGGGTTATGCCTGTGGGTGCGTTGCGACGCTCCCGCTTTTGTACTGGAGGTATTATCA
TTCCAATCAGGCTTCTGAACAGGAGTCTGGTCAGCATCGTCCTAATCTTAACGTCGCAGCTGGACCGTTCGCGTTCTCTATATCCA
GGACTGCTGAAGGAGATGGACGACAGAGCAGCAACACGCCTTCTCGTAGTAGATATCATGGGTTCATAAGTGCTGCTAGGCTTAAA
GTTATTGTGGAATACTTCAAAATGGCACTGGATTGCTTCTTTGCGGTGTGGTTTGTGGTTGGTAATGTATGGATATTCGGAGGGCA
TTCATCTGCAGCCGAGGCTCCTAACTTGTACAGGTTGTGTTTAGTGTTTCTTACCTTTAGCTGTATTGGCTACGCAATGCCCTTCA
TCCTCTGCACAACAATATGTTGCTGCTTGCCGTGCATTATCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869261 hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp. lyrata]11651e-125
CAA18601 putative protein [Arabidopsis thaliana]11508e-124
NP_194986 C3H4 type zinc finger protein [Arabidopsis thaliana]11508e-124
XP_002309588 predicted protein [Populus trichocarpa]8523e-089
XP_002324833 predicted protein [Populus trichocarpa]8415e-088

Swiss-Prot top hits (Blast detail)Scoree value
Q93Z92 E3 ubiquitin-protein ligase At4g116801342e-007
Q9LN71 E3 ubiquitin-protein ligase At1g127601299e-007
Q8LDB8 E3 ubiquitin-protein ligase At1g631701281e-006

TrEMBL top hits (Blast detail)Scoree value
O65539 Putative uncharacterized protein AT4g3260011505e-124
Q8VY23 Putative uncharacterized protein At4g3260011505e-124
B9H9P9 Predicted protein (Fragment)8522e-089
B9IKR5 Predicted protein8414e-088
B9RS95 Ring finger protein, putative8154e-085

Arabidopsis top hits (Blast detail)Scoree value
AT4G32600.1 zinc finger (C3HC4-type RING finger) family protein11503e-126
AT1G80400.1 zinc finger (C3HC4-type RING finger) family protein6791e-071
AT1G15600.1 unknown protein1593e-011
AT5G55970.1 zinc finger (C3HC4-type RING finger) family protein1583e-011
AT5G55970.2 zinc finger (C3HC4-type RING finger) family protein1583e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

Unigene Members