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Information for unigene UN84653
| FASTA Sequence |
| Unigene ID: UN84653 | Length: 824 |
SSR | | TCCTACATGTGCTCTGCCGCTTTTAATCTCCGTCTTCTTCCTCGTGTCACACTTTCTCACACTCTGCAAAAAAACATTTTCTTTCC
TAAAATCTCCAATCCAAGAAAAATCAAAGCTTAAAGCTTTCACTACAAAAGGGGCATCTTCCTCTTTACCTGTCGGTAACCAAACG
TTGCGTTTGTGTTATATTCCATTTTATAAGAGAATAATAACAAAAAGCTCTTTTTTTTTCTTTTTAACTTTCTCGGAAAATCTTCG
CTTTCCCCTTTCCTCTCTAGCAGTTTTCTATAAAAAAACTTCTCCTTCTTTGTTCTGAAGAGGAGCGTCTCTCTTGTTCTTCAAGT
TTCTTCCTCTGCTTTTTTCTAAAGTCTTATCTTTATCTTTGTCTCTTTCCTTTTTTTTCCTCTCTTTGCTTTTTCAAATGCTTTTT
CAATCTCTCTGATATATACACACAGAACACAGTCCAAGTAACAGAGAGAGAGAGAGAGAACAAATGGAACCGGAGAAGAATCTCGT
TCTCCCGAAGATCAAATTCACCGAGCACAAAACCAACACGACAAGAACCGTACCGAGTCACCACCAACAGCCAAGGCTTATCCGTA
TCTCCGTCACCGACCCAGACGCAACAGACTCCTCCAGCGACGAAGAAGAAGAAGAACAAAACCACCAACAGCGTTTCTCCTCGAAA
CGCCGTCGTATCAAGAAGTACGTCAACGAAGTAGTTCTTGATTCTGGCGCTACTACTACTTCCACCACTCAAATCGAACCGAATAG
GAGAAGGAAGAGACCGGTTATCGTCAAACCTGAACCGGCTCCCGCTCCGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869765 hypothetical protein ARALYDRAFT_492491 [Arabidopsis lyrata subsp. lyrata] | 324 | 5e-028 |
| ACC91243 unknown [Arabidopsis halleri] | 317 | 3e-027 |
| NP_194106 ethylene-responsive transcription factor CRF2 [Arabidopsis thaliana] | 302 | 2e-025 |
| AAM98190 putative Ap2 domain protein [Arabidopsis thaliana] | 299 | 4e-025 |
| XP_002319978 AP2/ERF domain-containing transcription factor [Populus trichocarpa] | 175 | 9e-011 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SUQ2 Ethylene-responsive transcription factor CRF2 | 302 | 8e-027 |
| O82503 Ethylene-responsive transcription factor CRF1 | 168 | 3e-011 |
| Q9M374 Ethylene-responsive transcription factor CRF6 | 146 | 9e-009 |
| Q9FK12 Ethylene-responsive transcription factor CRF3 | 142 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B2WS71 Putative uncharacterized protein | 317 | 2e-027 |
| B9I767 AP2/ERF domain-containing transcription factor | 175 | 6e-011 |
| B9RCN4 DNA binding protein, putative | 162 | 2e-009 |
| B9T335 Ethylene-responsive transcription factor, putative | 152 | 3e-008 |
| A5B445 Putative uncharacterized protein | 151 | 4e-008 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G23750.1 CRF2 (CYTOKININ RESPONSE FACTOR 2); DNA binding / transcription factor | 302 | 7e-028 |
| AT4G23750.2 CRF2 (CYTOKININ RESPONSE FACTOR 2); DNA binding / transcription factor | 302 | 7e-028 |
| AT4G11140.1 CRF1 (CYTOKININ RESPONSE FACTOR 1); DNA binding / transcription factor | 168 | 2e-012 |
| AT3G61630.1 CRF6 (CYTOKININ RESPONSE FACTOR 6); DNA binding / transcription factor | 146 | 9e-010 |
| AT5G53290.1 CRF3 (CYTOKININ RESPONSE FACTOR 3); DNA binding / transcription factor | 142 | 3e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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