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Information for unigene UN84834

FASTA Sequence
Unigene ID: UN84834Length: 871 SSR 
TGATATCATATGACCCTTAACCCAATAGGGTGAGACTATCGATTGATATAATAGGGAATATATATATGATATAAATCACACCATCA
CAAGATGATGCGACTCGAAAGAGCCATCGTCTCACCATTAAAGATTCATGAGCCAAAGCCAACTGGTTTTTTTGCTAATTTTCTTA
AATTTGAATCATTATTCACCAAAAGACCTAACCCTAATAGCCGCATACGCAACCTAGTTTCTCCCATTGACGGCAGACTTCTCTCG
ATCTCCGACGAATCTCCAGCTCTCTCTCTCTCGGTCCGGCGAGCGCTCTCTTCTCCGACGCATCGCTCTCTCTCTCTCCCGACCAA
AACCCATAGCTGTCTCTCCCGATCTCCGACGCAAACCCATCTCGAGCTCTCTCTCTCTTCTGTGTGTTTGGTAAGATTATTTCATC
CTATTTAAGTTCCTTGTTTGATGCCCTAGTGTTGAGTATCAGACTGTTTATGTCCTTACTTGTTTGAACTGTTTTAATTTCTATGC
TCCTTGGTGCTACTGGAGTAAACGTTTGGTAAAAGATTTTGAAGCTTTTGGCTTGTGGAAAAAAAAATCAGAGAATGGCCAAGTAC
TATGACATTGACGACATACTTACAGAGGAAGAGTTTGCTCCTGTATTGTTCCATAAGCCAGCAAATGGAGTGACTATTGATCCAAG
TGCTGAGACAAACTCTGTTGAGCAAGGAGCTAAAGTGGAGTTACCTTTTTGGCTTGCTCACGAGTTGCATTTGAGACAAGCTGTCT
CCATTAACCTTCCTGCCTGTTTTGACCAAAAGACGAGGTTGGAGATACAGGCTGATGCAGCATGTGTGGATCTTAGATCACGATGT
CCTTACTTCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001078297 GINS complex protein [Arabidopsis thaliana]4383e-041
ABK28336 unknown [Arabidopsis thaliana]4383e-041
XP_002878035 hypothetical protein ARALYDRAFT_485976 [Arabidopsis lyrata subsp. lyrata]4383e-041
XP_002513028 conserved hypothetical protein [Ricinus communis]3892e-035
XP_002311220 predicted protein [Populus trichocarpa]3863e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q0UPV4 DNA replication complex GINS protein PSF31272e-006

TrEMBL top hits (Blast detail)Scoree value
A0MDR5 Putative uncharacterized protein (Fragment)4382e-041
Q6NNH6 At1g190804382e-041
B9RG76 Putative uncharacterized protein3891e-035
B9HHP3 Predicted protein3862e-035
B9HSP2 Predicted protein3763e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G19080.1 TTN10 (TITAN 10)4381e-043
AT3G55490.1 CONTAINS InterPro DOMAIN/s: GINS complex, Psf3 component (InterPro:IPR010492); BEST Arabidopsis thaliana protein match is: TTN10 (TITAN 10) (TAIR:AT1G19080.1); Has 224 Blast hits to 224 proteins in 105 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 76; Plants - 22; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).4381e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  100%

Unigene Members