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Information for unigene UN84897
| FASTA Sequence |
| Unigene ID: UN84897 | Length: 795 |
SSR | | TTTCCTCTCCATTTTCTCGGCAGTTTCTCTCCATTTTCTCGGTTCTTCTCTTCTGCAGAACCGCCGCGATTCTCACCGCCGAACTA
TGGAAAACAACTCCGCCGATGGCGCCGTCGCTCGCTCCCGTGACCAACTCTACTACTCTACTCGCAGCGTTATGCAGCAGCGCCGC
CAAGACATGGTGAACCGAGAGGCACTGTGCTGCACGCGCCTCCACGAGGCGACTCTCGAAGCGGAAGCTCTCCGTCTGGAGAACAC
CGAGCTCCGTTCGCTGAATCTCCTCCTCAAGAAAGAGATCGACCAGCTCATCCGATCCTCCCTCCGCAACCGTTACAACAGGGCTC
CGCTTCGGACGCTCGGAGGGAATAACGAGAATCGGAGCCCCCCGGCGGCCGCGGCGGGGGATCGGAACCGACGAGATGATGATGAC
GTCAGCGATGAGAGTCCGACGAATGAGGATGTGAACCGGTCTTCTCTGCCGAAGAGCATCTCCGTGAGATCAAGCGGTTACTCTAA
GGCGAGCGTAGGAGGTGGTGGTGGTGGTTTCGTTGTTCAATCTCGTGGAGCCATACCTAAGCCTGGGACTTGTGCTCAACAACGTA
TCACTACCACGCGAAAGGTATATGTGCGAGGAGGGAAGAAAGAAGAAGACGAGGAGGAGGAGATAGAAGTGGAGGTGTACAATCAA
GGGATGACAAAGACAGAGCTTTGCAACAAATGGCAAGAGACAGGGACATGCCCATATGGTGACCACTGCCAGTTCGCTCACGGTAT
TAAAGAACTCCGCCCGGTGAT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_176987 zinc finger CCCH domain-containing protein 15 [Arabidopsis thaliana] | 778 | 1e-080 |
| XP_002887169 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 774 | 3e-080 |
| NP_001077792 zinc finger CCCH domain-containing protein 15 [Arabidopsis thaliana] | 767 | 2e-079 |
| XP_002282967 PREDICTED: hypothetical protein [Vitis vinifera] | 471 | 4e-045 |
| CBI26957 unnamed protein product [Vitis vinifera] | 471 | 4e-045 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9C9F5 Zinc finger CCCH domain-containing protein 15 | 778 | 5e-082 |
| Q6L5G1 Zinc finger CCCH domain-containing protein 39 | 270 | 4e-023 |
| A2ZVY5 Zinc finger CCCH domain-containing protein 9 | 249 | 1e-020 |
| Q9C9N3 Zinc finger CCCH domain-containing protein 14 | 213 | 2e-016 |
| Q10MN8 Putative zinc finger CCCH domain-containing protein 21 | 189 | 9e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SJY0 Zinc finger protein, putative | 440 | 1e-041 |
| B4FYF9 Putative uncharacterized protein | 295 | 7e-025 |
| B9SQ02 Zinc finger protein, putative | 281 | 3e-023 |
| B7EZ94 Putative uncharacterized protein | 270 | 6e-022 |
| B8AX89 Putative uncharacterized protein | 270 | 6e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G68200.1 zinc finger (CCCH-type) family protein | 778 | 4e-083 |
| AT1G68200.2 zinc finger (CCCH-type) family protein | 767 | 8e-082 |
| AT1G66810.1 zinc finger (CCCH-type) family protein | 213 | 1e-017 |
| AT2G35430.1 zinc finger (CCCH-type) family protein | 128 | 1e-007 |
| AT1G32360.1 zinc finger (CCCH-type) family protein | 115 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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