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Information for unigene UN84911
| FASTA Sequence |
| Unigene ID: UN84911 | Length: 896 |
SSR | | CCATGGCCGCCTTCTCCGTCAACGGGCAGCTCATCCCGTAAGCGACAAGCTCCGCCACTCCTAACTCCATCTATCCCCTACGGAAA
TTTCTATCTCCTTCCTCTTCTCGCCTTCCCCGTATCTCCTCCTCACCTTCTCCTCCTCGCGTCCCATCCATAAAATGCAGCAGCAG
CAGCAGCTTACCTAGCCGCCGCGATTCAGAATCATCCTCTCTCCTCAAAGACCTAGCCAAACCTCTCGCCGTGGCCTCTGTCTCCT
CCGCCGCTTCCTTCTTTCTATTCCGAATCTCGAATCTCCCGTTACTCCTAATCGGAGGCGGCGGAGGAGGAGGAGGAGGCGATGGA
AACTTCGGCGGATTCGGCGGTGGTGGCGGCGGAGATGGATTTTGGGGGAAACTGTTTTCCCCGATGGCTGCAGTTGCCGACGAAGA
AGAGTCGTCGCCGGATTGGGATTCTCACGGCTTACCTGGCAACATCGTCGTGCAGTTGAACAAGCTGAGCGGTTTCAAGAAGTACA
AAGTCTCCGACATCGTCTTCTTCGACCGGAGGAGACAGACCTCGATCGGCGCCGAGGACTCCTTCTTCGAGATGGTGTCGATCCGC
CCAGGGGGAGTCTACACCAAAGCTCAGCTCCAGAAGGAGCTCGAAACCCTAGCCACCTGCGGGATGTTCGAGAAAGTCGACTTGGA
AGGGAAGACGAAACCGGACGGGACACTAGGAGTCACCATCTCATTCGCGGAGAGCACGTGGCAGTCAGCTGATAGGTTCAGGTGTA
TCAACGTGGGGCTGATGGTGCAGTCGAAGCCCGTCGAGATGGATGCTGACATGACTGATAAAGAGAAGATGGAGTACTACAGGAGC
CTCGAGAAGGATTACAAGAGGAGGATCGATAGGGCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877511 translocon outer membrane complex 75-III [Arabidopsis lyrata subsp. lyrata] | 1265 | 4e-137 |
| NP_190258 protein TOC75-3 [Arabidopsis thaliana] | 1237 | 7e-134 |
| XP_002520530 sorting and assembly machinery (sam50) protein, putative [Ricinus communis] | 924 | 1e-097 |
| XP_002280661 PREDICTED: hypothetical protein [Vitis vinifera] | 846 | 2e-088 |
| XP_002299371 predicted protein [Populus trichocarpa] | 834 | 4e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9STE8 Protein TOC75-3, chloroplastic | 1242 | 9e-136 |
| Q43715 Protein TOC75, chloroplastic | 697 | 1e-072 |
| Q84Q83 Protein TOC75, chloroplastic | 657 | 6e-068 |
| P12978 Epstein-Barr nuclear antigen 2 | 155 | 1e-009 |
| O73590 Zinc finger homeobox protein 4 | 148 | 6e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S3G1 Sorting and assembly machinery (Sam50) protein, putative | 924 | 1e-097 |
| B9GMY2 Predicted protein | 834 | 3e-087 |
| A5BDU2 Putative uncharacterized protein | 792 | 2e-082 |
| Q2HS34 Bacterial surface antigen (D15) | 696 | 3e-071 |
| B8AKQ1 Putative uncharacterized protein | 654 | 2e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G46740.1 TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven protein transmembrane transporter | 1242 | 8e-137 |
| AT1G35880.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; BEST Arabidopsis thaliana protein match is: TOC75-III (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III); P-P-bond-hydrolysis-driven protein transmembrane transporter (TAIR:AT3G46740.1); Has 233 Blast hits to 216 proteins in 61 species: Archae - 2; Bacteria - 45; Metazoa - 90; Fungi - 9; Plants - 56; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). | 224 | 9e-019 |
| AT1G54215.1 proline-rich family protein | 138 | 8e-009 |
| AT3G22800.1 leucine-rich repeat family protein / extensin family protein | 132 | 4e-008 |
| AT4G13340.1 leucine-rich repeat family protein / extensin family protein | 123 | 5e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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