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Information for unigene UN84924
| FASTA Sequence |
| Unigene ID: UN84924 | Length: 903 |
SSR | | AACTTTTAACCCTCTTTCTCTCTCTCTTTTCCTTCCTTCAAAGTTTCAAAATAATCAGAAATTGCTCGTATTTTTATTTCGTCCGT
GAGAAAAAAGGAATAGGGGCATGGAAGAAGAAGCAAACGCAACGAGATATTGGTGCCACATGTGTTCCCAAACCGTGAACGCGGTG
GTGATGGAAGAGGAGATCAAATGCACCCTCTGTCGAAGCGGCTTTATTGAAGAGATGGATGAGGATCATCACCACTCTTCTTCAGA
TGGCAATGATCGGAGGAGAGCAACAAACAACGCTTCAATCTTGGCTCCCATCTTAATGGAAATGATCAACAACTCTTCGTCTTCTT
CTGCTACAAGGAACCTTAGTGCTGAGACTCTGAACGAAATAATCCGAAACAACAACAACAGACCACGCTCTGTTTCCGTTGTGCAA
CTTCTTCATGGAGTAAGACCACTTGAACCTGAGAGTAGCGATGATAACAACAACAACAACAACAACAACGATGGGGCGGATGGAGA
GAGAGAGAGAGGACGCATGATCTTCATCGATCCGCATCGTCAGTTCATCGCCATCCCGAGCTCTCTCGTTAGGGATTCCATCCCTG
CTGGTTCTTCTCTGAGCGACTATTTCATCGGTCCTGGATTCGAAGCCCTGCTTCAGCGCTTGGCGGAGAATGATCCCAACAGATAC
GGAACTCCTCCAGCTCGTAAAGAAGATGTTGAGTCTTTGGCTACTGTCAGAATCGAGGATCCTAGTCTGCAGTGTTCCGTGTGTTT
GGATGATCTCGAGGTTGGGATCGAGGCTAAACAGATGCCATGTAAGCACAGCTTCCATGCTGACTGCTTGCTCCCGTGGCTTGAGC
TTCACAGTTCTTGCCCTGTTTGTAGGTATCAGTTACCTACCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001147077 RING finger protein 126 [Zea mays] | 641 | 1e-064 |
| XP_002882822 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 621 | 2e-062 |
| NP_187951 RING/U-box domain-containing protein [Arabidopsis thaliana] | 605 | 1e-060 |
| AAR20783 At3g13430 [Arabidopsis thaliana] | 604 | 2e-060 |
| XP_002894508 zinc finger family protein [Arabidopsis lyrata subsp. lyrata] | 496 | 6e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9Y4L5 E3 ubiquitin-protein ligase RNF115 | 214 | 1e-016 |
| Q9BV68 RING finger protein 126 | 210 | 4e-016 |
| Q0II22 RING finger protein 126 | 209 | 5e-016 |
| Q6DIP3 RING finger protein 126 | 207 | 9e-016 |
| Q9D0C1 E3 ubiquitin-protein ligase RNF115 | 206 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B6SKJ6 RING finger protein 126 | 641 | 7e-065 |
| Q9LJE9 Genomic DNA, chromosome 3, P1 clone: MRP15 | 605 | 1e-060 |
| Q6NMJ8 At3g13430 | 604 | 1e-060 |
| Q9ZVU8 At1g55530/T5A14_7 | 491 | 2e-047 |
| Q9FM98 Genomic DNA, chromosome 5, P1 clone: MCD7 | 485 | 8e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein | 605 | 6e-063 |
| AT3G13430.2 zinc finger (C3HC4-type RING finger) family protein | 605 | 6e-063 |
| AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein | 491 | 1e-049 |
| AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein | 485 | 5e-049 |
| AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein | 366 | 3e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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