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Information for unigene UN84951
| FASTA Sequence |
| Unigene ID: UN84951 | Length: 843 |
SSR | | TATATATATATATCTAAGCTCTTAATTCATTCCATAATATAAGATCTTAACTTCAAATATCTTCCTCAAATTTTTTTTTACATAGT
TCTGATTTGTTTGTATAGGGCGGCACAAAAAAATGGCGGAACAGCGGATGCAACCAGTGGCCTCTTTGCTTCTACTCCTAAATTTC
TGCATGTACGCCATTGTTCTCGGTATTGGAGCATGGTCCATGAACAAAGCTATCAGCCATGGCTTCCATATTGGATATTTGGAGTT
GGGCCAGGACTTCATCAATTTAGGCCCACTAATCCATCAAACTCCACCTTGGGCCTAAATGTCTTCTCCCCCATATTTTACGTCTT
TGACGTTATCGAAGATCAGAATCTTCCTTTCTGCAATCTTCAGTCGACAAGCTCCAACAAGATCTCTGAAGTCACCACTTTCACCA
CGCTTTACAAACCACCAGTCAAGCTCCCGTCGTTCCTGGATCCAAGCACGAGTTCGTGAGGTCTGATCACCCTTATGCTTTCGTAC
TCTGTCACTGCAACAAACTTCGACTTTTCCGATGAAACTCTCCTCTCCACCATCGTTACTATCCACACAGTAGCTCTAATCCGTGA
GATTCAACCACTGATGCGCATCCTCTAGTGGTTTCTCATCTTTACGGAATGCCGTTACCGCAGGAATGCCGTTACCGCAAGAGATG
ACCCTTCCTTCAAAGATGAATAGACGAACTAGTTTCACCGGAGTTCTGCAGTTTTCCGAACCTTCGGTGATTCTCGCAGCTCTGTC
AACTTGTTTACGATGATGACTTTTTTCTTTTGCTTGTTTGACGATCCTGTTGTGCTTCTCCTTTAACCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865183 hypothetical protein ARALYDRAFT_330772 [Arabidopsis lyrata subsp. lyrata] | 190 | 2e-012 |
| NP_199465 AWPM-19-like protein [Arabidopsis thaliana] | 185 | 6e-012 |
| XP_002519754 conserved hypothetical protein [Ricinus communis] | 178 | 4e-011 |
| ACU16487 unknown [Glycine max] | 171 | 3e-010 |
| XP_002890814 hypothetical protein ARALYDRAFT_473160 [Arabidopsis lyrata subsp. lyrata] | 168 | 6e-010 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S185 Putative uncharacterized protein | 178 | 3e-011 |
| C6T477 Putative uncharacterized protein | 171 | 2e-010 |
| A5Y734 AWPM19-like protein | 165 | 9e-010 |
| C6T3W1 Putative uncharacterized protein | 164 | 1e-009 |
| Q9C7P9 Plasma membrane associated protein, putative; 66162-66952 | 164 | 1e-009 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; CONTAINS InterPro DOMAIN/s: AWPM-19-like (InterPro:IPR008390); BEST Arabidopsis thaliana protein match is: AWPM-19-like membrane family protein (TAIR:AT1G29520.1); Has 98 Blast hits to 98 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 185 | 3e-014 |
| AT1G29520.1 AWPM-19-like membrane family protein | 164 | 7e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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