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Information for unigene UN84962
| FASTA Sequence |
| Unigene ID: UN84962 | Length: 765 |
SSR | | AAGTGCAAATCAGAGAGATTCTGACATTCTAGGTAATAAACGATTTCCAGACAAGAGAGTCCCAAGAAAACTGAAACATGAGGCCC
ATTCACAAGGTTCCACACCATAAATCCATTTTCTAAAAACTCTCTCTCTCTAACATTTGGAGGACCCCATAACCCAAAAAAGCTCT
CTTAGCACTCTGCAAGTTGTTGAGACTTGAGACTTGAGACTTGAGACTTGAGAGTGATGTTTCTTACTTGCTTCCCCATGATCCAT
GACCAAATATCTCCTCCATAATGCTCCTTGTTGGTTGAAGATCTTTGCCATTTGTTGGAACTTTCGTATCACTACATTCCTTCGAC
TTCCTCTGATGTTCACCAACACCTGTTTCGTCTTTCTTTGTACAGTTCGTCCATGCAGAGTTCAATGCATCATGTGCAAGCTCAAA
GGTCGTATATGAGTCATCTTCCACTTTTAATCTCTCCTCATTTCACCCCGAATATCTATCCACATGTTCAGCACCACCTTCTCTGG
TATCCACATCATCATTGTCACTAACGCTGACATCTTCTTCACCTTCTTCTTGATGGAACGGATGCACTTTCTCGTTAAATTTGTCA
GTACCTTGATGAAGAGGAGATTCAATAGCAGAGTCTTCTTCCTCTTCTTCATCTTCCTCGACATATTGAGTCCCCAAAGAGCCTCC
ATAACCTCCATGCCATTCATCATCATCACTATCAATGTCCAATATCAATGACCTGTTCTGGGTGGCCCTTCGTCTGA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_173980 uncharacterized protein [Arabidopsis thaliana] | 544 | 1e-053 |
| XP_002893395 hypothetical protein ARALYDRAFT_472751 [Arabidopsis lyrata subsp. lyrata] | 366 | 6e-033 |
| XP_002876888 myb family transcription factor [Arabidopsis lyrata subsp. lyrata] | 185 | 5e-012 |
| CAN60165 hypothetical protein VITISV_040087 [Vitis vinifera] | 137 | 2e-006 |
| XP_002274465 PREDICTED: hypothetical protein, partial [Vitis vinifera] | 137 | 2e-006 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FZE2 At1g26580 | 544 | 9e-054 |
| A5AF94 Putative uncharacterized protein | 137 | 1e-006 |
| B9REG1 ATP binding protein, putative | 131 | 7e-006 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G26580.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: myb family transcription factor / ELM2 domain-containing protein (TAIR:AT2G03470.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 544 | 5e-056 |
| AT2G03470.1 myb family transcription factor / ELM2 domain-containing protein | 121 | 6e-007 |
| AT2G03470.2 myb family transcription factor / ELM2 domain-containing protein | 121 | 6e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Unigene Members | |
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