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Information for unigene UN00165

FASTA Sequence
Unigene ID: UN00165Length: 1430 SSR 
GGAGCACTGAGACATCAAACATGGTTTCTTCCCTCTTTCACCTCTAAAAATCAATTGGCCCTAAAAATCCCTTTTACAGTATTAAT
CTTAAAAGTTCCTCTCTCATCTCTTGTCTCCGTCTCTCTCTCTCTCCATTAAAACCATTCACAAGCAAAAAGCTTTGAGCTTTTAA
TGAGTTTAAGATCCTCTTCGGTTCCTCCTGCAAAAACTGGGCTGTTACTCGTGTACTTGCTCTTATACCTGGTTATAATTTTAACT
AAACTCTAATTAAGAAGAAGGCAATGGATATGAGAAGCCATGAAATGGTAGAGAGACGAAGAGATGACAATGGCAACAATGGTGTT
GGTAACATCAGTAGCATTGCAAATGAAGATAATGTCAACGGTAACAACACTCGTGTCTCTTGCAACTCTCAAACCCTAGATCACCA
CCAGTCCAAGTCTCCCTCTTCTTTTGCCATCTCCGCCGCCGCTAAAACCGCCGTACGGTACCGGGAGTGTCTCAAGAACCACGCGG
CCAACGTCGGCGGAAGCGTGCACGACGGATGCGGCGAGTTTATGCCGAGCGGCGAGGAAGGAACGATCGAAGCTCTCAGATGCGCC
GCTTGCGATTGCCACCGTAATTTCCACCGGAAAGAAGTCGACGGTGTCGGAAGCTCGGATGTAATCGCTCACCACCACCGTCAGCA
CCACCATCAGTACGGTGGAGGAGGAGGAGGGAGGAGACCGCCGCCGCCGAACATGATGCTTAACCCACTCATGCTTCCTCCGCCGC
CGAGTTACACGCCGATGCACCACCACAAGTACGGAATGAGTCCGCCTGGCGGTGCAGGAATGGTGACGCCGATGAGCGTCGCTTAC
GGCGGCGGGGGTGGAGGTGGAGGAGGAGCTGAGTCGTCTAGTGAAGATCTGAACATGTACGGACAATCAAGCGGAGAGCATGGAGG
AGGAGGAGGAGCAACGGCGGGACAAATGGCGTTTTCGATGTCGTCGAAGAAACGGTTCAGGACGAAGTTCACGACGGAGCAGAAGG
AGAGGATGATGGAGTTCGCGGAGAAGCTAGGATGGAGGATGAACAAGCAAGACGAAGAAGAGCTCAAGAGGTTCTGTGGTGAGATC
GGAGTTAAGAGGCAAGTCTTCAAAGTGTGGATGCATAACAACAAGAACAATGCTAGGAAACCACCACCGTCGACAGTAACAGGAAG
TACTCTCTAATGGTGAGAGATTATGTAAGAGATTATCTTTTAATCTATTGTTGTTGTCTTTTTTATTTTAATGTTATCTAGGTTTT
TGTAGCTTGTACGATCTTTGGATCATTCAATGGATGTTTTGTTTGCGTAGTTAATGTTTTTTTTTTTTTAATTTGGTTTGTTTTTA
TTTTATTTCGTATGTGTTTTTGTCTTTTACCCAGTTCGTACTGTAATCAGCCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34360 unnamed protein product [Thellungiella halophila]14064e-153
XP_002887580 hypothetical protein ARALYDRAFT_895391 [Arabidopsis lyrata subsp. lyrata]13992e-152
NP_565106 homeobox protein 33 [Arabidopsis thaliana]13876e-151
XP_002510399 transcription factor, putative [Ricinus communis]6653e-067
XP_002306871 predicted protein [Populus trichocarpa]3893e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKP8 ZF-HD homeobox protein At5g654102734e-023
Q9SB61 ZF-HD homeobox protein At4g246602564e-021

TrEMBL top hits (Blast detail)Scoree value
Q9FRL5 At1g7524013874e-151
B9R7V6 Transcription factor, putative6652e-067
C5Y7T9 Putative uncharacterized protein Sb05g0070505561e-054
B9H8Q9 Predicted protein3892e-035
B9GRN0 Predicted protein3802e-034

Arabidopsis top hits (Blast detail)Scoree value
AT1G75240.1 AtHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33); DNA binding / transcription factor13872e-153
AT2G18350.1 AtHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24); DNA binding / transcription factor3173e-029
AT1G14440.1 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor2823e-025
AT1G14440.2 AtHB31 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 31); DNA binding / transcription factor2823e-025
AT5G65410.1 HB25 (HOMEOBOX PROTEIN 25); DNA binding / sequence-specific DNA binding / transcription factor/ transcription regulator2733e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  25%
 
182  50%
 
191  25%

Unigene MembersMember information