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Information for unigene UN00345

FASTA Sequence
Unigene ID: UN00345Length: 1331 SSR 
GGCTCTCACCCACTTTCGAAAACAACAAACATCATTCATCGCCATCATCTCCAGTGTCTCCCCCTTTTTCGAATTTCCTGTTTTCA
TCGCTCTCTCTCTCTCTACGCTGAGCCCCGATCGGAAGGTTGATTTTGGGGGGCAATTGCTTCTTCTCTCTCCGTCCAGCTCAATT
CTCGATCAAAAAGACAACTTAACTTGGAGATATGAAGCAGACTGTTTACCATACGTATTGAGGAACGAGAGACTTATTTAGATAGA
AACAACTTTCAATCTTTTGTTCTGAGGTTAAGAAATCATAGAGAGGAGGAGGAGGAGAAGGAGAAGATGGGATGTGTTTCGTCTTG
CTTTCGAGTCCAAGATATTGATGAGTACATGAATCCAAATAGCTCTGTCTATAGGAACTGTCCCTGCATAAGATGCCTTGCTCGTA
ACTTCCTTAACCTGTATGTATCCATGTTCGGAAGAGGGGAAACCCGTGCTCTACCATCTTCCGTTCAAGCTACTACTCCATCAATT
ACTTCCTCTTCTTCACACGATAACTTCCTGTCTGAAGCCTTCCGCTCTACTCCAAGGCCTCTGCCTTACGATGCTGATCCTAGGCA
CTTTCGTTCGCTCGTCTCAAGACGGGAGAAGGGTTCAAGTCACTCCCACGAGGAAGCTGAGCCTCTGAGGAGTGATAGCGATGCGG
ATTCTGAATCTTTCGGATGCAAATGGGCAAATAACAAATCGGTTGTCTCTGAGAAAGATCCAAAAGAAGAGTACTCCAGTAAATCC
AGTCTTAGGATTATGAAATCAAAGTCAGCGTCTGGAAACATATGGGATTTTCCTTTGTCTGAAGATGAAGATGCATGTCCAACTTG
TCTTGAAGAATATACATCAGAGAACCCAAAGATTGTAACAAAATGCTCTCACCATTTCCACCTTGGTTGCATTTATGAATGGATGG
AGAGAAGTGAGAACTGTCCTGTCTGCGGAAAGGTGATGGAATTCAATGAAACACCATGAACATCAATCATCGATCATCTATCTGTG
TGTCATGTATCTGAACTGAAACCAGGGAAGATGGCAAGGCAATTGCAGAGGGGATGTTCTGTAAATTTGGCTTGTTGGTTTTTGTG
AATATTGTCATTTTACAATGTTAAAATATATGAAGCAGAAAGGGTGAAAATGTACCTCTGCAACATTTTAAGCTTTTTATGATATG
GCCAAAGAAAAAAAATGCAAAACAAGAAGCAATGTTCCCTTTTCTTAAGTGATTCTTCTGAATAACTTGCCTCTGTTGTATTGTTG
AATCGTCAATCTCTTACATAATTGTTGGTATATAAGTTACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882219 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]10453e-111
NP_566169 E3 ubiquitin-protein ligase [Arabidopsis thaliana]10434e-111
ABD96851 hypothetical protein [Cleome spinosa]9073e-095
ABD96894 hypothetical protein [Cleome spinosa]8832e-092
NP_197083 RING/U-box domain-containing protein [Arabidopsis thaliana]8607e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q8LE94 E3 ubiquitin-protein ligase At3g0229010432e-112
Q9Y4L5 E3 ubiquitin-protein ligase RNF1151247e-006
Q9D0C1 E3 ubiquitin-protein ligase RNF1151247e-006

TrEMBL top hits (Blast detail)Scoree value
Q1KUY5 Putative uncharacterized protein9072e-095
Q1KUU2 Putative uncharacterized protein8831e-092
Q9LFU7 At5g157908605e-090
Q1KUQ0 Putative uncharacterized protein7898e-082
C6TMU9 Putative uncharacterized protein7234e-074

Arabidopsis top hits (Blast detail)Scoree value
AT3G02290.1 zinc finger (C3HC4-type RING finger) family protein10441e-113
AT5G15790.1 zinc finger (C3HC4-type RING finger) family protein8612e-092
AT5G15790.2 zinc finger (C3HC4-type RING finger) family protein8612e-092
AT3G02290.2 zinc finger (C3HC4-type RING finger) family protein7861e-083
AT5G38895.1 zinc finger (C3HC4-type RING finger) family protein6093e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  71%
 
82  29%

Unigene MembersMember information