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Information for unigene UN00749
| FASTA Sequence |
| Unigene ID: UN00749 | Length: 873 |
SSR | | GGATATAAAATGAACGTGATCCTCGTGTCGGTCTCTCTCTCTCTCTAGAATATTTGCTTGGTCCAAACAAACAAAAGAGCTTGACC
TTTTTGTTCATCTCCAAACCATTTCAACTCAAAGTAAAGGTTGATTACAAAAAATGCTCCGACTAGCGATTTCTTTGTTCCTCTTT
GCATTGTTCTCTGTCACATCTGCAAGATCTTTCGTCACCACAAGACCTGGACCGATTGATTCATTTCTCCCTAAACCCAAGCTAGA
GGGTGCGAGTGTGTGTTCTTACACAGTGATCATTAAGACAAGCTGTTCCTCGGTGTCTTACACCAGAGATAAGATCAGTATTGCCT
TTGGTGATGTGTACGGCAACGAGGTATACGTGAAGAGACTAGACAATCCAAAGGCGAGGGCATTTGAAAAGTGTTCCTCAGACACA
TACAAGATAACGGGACCGTGTATGCGTGACGTATGTTATCTCCACCTACTCAGGCAAGGATCCGACGGCTGGAAACCAGAGAACGT
CAAGGTATACGGCTCATCCATCAGATCAGTCACTTTCTACTATAACCTCTTCTTGCCAAACGGAGTTTGGTACGGCTTTAACGTCT
GCAACGGCATTGCCGATGCCAATGACAAGTCTTCTCAACCCATCATTGCCTCCGTTGCTGCTATGTAAGATCAATAAAAACAAAAA
AGGTTGATTATCTTGTGGATTTGCTATTTTGTGGCGGAAACTGAAGAGAAGCAAACTTGTGTTTTGAGTGTATTTGTGAGAAAAAA
AACATATAATGCCTTTGATTTGATCTCTTGCAAGTTGGGGATTAGCAAGTGGCCAAGTCCTTTTTATATGAAATAAATAAAAATAG
CATGCATTGGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002881777 hypothetical protein ARALYDRAFT_483224 [Arabidopsis lyrata subsp. lyrata] | 778 | 1e-080 |
| NP_001118501 Embryo-specific protein 3, (ATS3) [Arabidopsis thaliana] | 770 | 1e-079 |
| AAC23732 unknown protein [Arabidopsis thaliana] | 766 | 3e-079 |
| XP_002524493 conserved hypothetical protein [Ricinus communis] | 505 | 5e-049 |
| XP_002324656 predicted protein [Populus trichocarpa] | 503 | 9e-049 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q681K2 Putative uncharacterized protein At2g41470 | 770 | 7e-080 |
| O80821 Putative uncharacterized protein At2g41470 | 766 | 2e-079 |
| B9SES4 Putative uncharacterized protein | 505 | 4e-049 |
| B9IMZ8 Predicted protein | 503 | 6e-049 |
| B9HAK9 Predicted protein | 492 | 1e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G41475.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Lipase/lipooxygenase, PLAT/LH2 (InterPro:IPR008976), Embryo-specific 3 (InterPro:IPR010417); BEST Arabidopsis thaliana protein match is: embryo-specific protein-related (TAIR:AT5G62200.1); Has 60 Blast hits to 60 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 771 | 3e-082 |
| AT5G62200.1 embryo-specific protein-related | 428 | 2e-042 |
| AT5G62210.1 embryo-specific protein-related | 302 | 8e-028 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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