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Information for unigene UN01620

FASTA Sequence
Unigene ID: UN01620Length: 1005 SSR 
GGCTCCTCAAAAGATCATCCTCCTGCATCTTTCAAAACCCTAGATTCACCAGAAAGACTTAATTCCCGATTCTCTCCGGAGATATT
CTCAGAGTCAAATTCGCGTCACGGTGCAAAAACGTTTTTGGCTAATCTGAGTTTGGAAGATGAACAACACACAAGAGTTGAGATGG
ACTCGTTGCGGCGGCGGCTTTCGACGGAGGAAAGCTTTGATTGATCTTAATCAGGCGCCCAGAGATCAAGAAGGAGGGACCTCTGC
TTCCGAAACAGCACCTCCTATTCAAGCTTCGCAGCCTGTCCATGCCATGATTGATGTCGATGCTATTGAAGATGATGTTGTTGAAT
CATCCGCTAGTGATTTTGCTGAAGCTATAAGCAAATCATCAGGTGCACGCCGGAGACGTTCGAGGGATGGTGTAGAGTCAGGTGGT
GCGGCTAGATTGTCTCCCAGTAAACGGAGGAGAGTTCCTCCTAACCAACCTGTGATCGACTGTGAGGATGTCTCTCCAACTCCTCC
TCCTCCTCCTCCACCGGAGGAGCCTAAATTTTCGTGTCCGATTTGTATGTGTCAGTTTACTGAGGAGATGTCAACCAAATGCGGCC
ACATCTTCTGCAAGGGATGCATAAATATGGCGATATCTAAGCAAGGCAAGTGCCCTACTTGTAGGAAAAAGGTGACTGCGAAAGAG
CTGATTCGAGTGTTCCTTCCAACCACCAGATGATTGAGATACATCAACATTACCAATCACCTTGTCTAATTGTTTGTCAGATTACA
TACTCAAATTCGCGTTGGAACATTGAAGGGACTTGGTTTGAATATTTCACTTTTTGTTGGAAGACAAAGTTGATTATTCAATAAGG
CCCCTATCATTTAGTTGGATTATCAAATGTCTAAGCAACTCTTTGTTTCCTAGTTGCTGTTTTATGTAATTTAGGTCTCTCCGCAA
ACCTCTCAGGCAATGTCTCTCTGTTATAGATGAAAATTATATATGGGAAAACTTTTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882517 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]3982e-036
NP_187376 RING/U-box domain-containing protein [Arabidopsis thaliana]3954e-036
BAC43036 putative RING finger protein [Arabidopsis thaliana]3911e-035
ACU14889 unknown [Glycine max]3703e-033
NP_568701 RING/U-box domain-containing protein [Arabidopsis thaliana]3613e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9QZS2 RING finger protein 41424e-008
Q28DS3 RING finger protein 1701362e-007
Q3MV19 TNF receptor-associated factor 6-A1343e-007
P78317 RING finger protein 41334e-007
O88846 RING finger protein 41334e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SFV0 Putative RING zinc finger protein3953e-036
Q8GX56 At3g072003918e-036
C6T066 Putative uncharacterized protein3702e-033
Q8GS41 Putative RING zinc finger3612e-032
Q8LF11 Putative uncharacterized protein3612e-032

Arabidopsis top hits (Blast detail)Scoree value
AT3G07200.1 zinc finger (C3HC4-type RING finger) family protein3961e-038
AT3G07200.2 zinc finger (C3HC4-type RING finger) family protein3961e-038
AT5G48655.2 zinc finger (C3HC4-type RING finger) family protein3621e-034
AT5G48655.1 zinc finger (C3HC4-type RING finger) family protein3621e-034
AT5G48655.3 zinc finger (C3HC4-type RING finger) family protein3621e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  100%

Unigene MembersMember information