 |
Information for unigene UN01691
| FASTA Sequence |
| Unigene ID: UN01691 | Length: 1248 |
SSR | | GGAGAAACGGATTCCCCCTCATTAACTCCTCCTTAATCAATCACACACGATCTCCATTCAATGCGACCCTGAGAGTGCAAGGCGGT
GGACACTCTGCTATATAAAGACTGGCCACTCCTCCTCCTCCTCCGTTCAAGTTCGCCTGCTTCGATTTTGGGAGGCCAGGAAACAT
CCTGCGTGATGGAGAGCTTATGGGAGTCGACATGCTCTTTCTAAATTCTCAGGCGACTATGATGCCTCGAAGCTCACGATGCTTTA
AGTACACGAAGCTCACGGAGTAGTGGAAATGGTTTGATGCATTGAAGCGAAAAGATGAATCATCTCGCCCTGGAGACCATTGGTGT
TGGGAAGAAGAAGCTTTATGCAGCTAAAGCGTGGGTGAAGCCAAGGTTGAACTTCAAGGACTCGCAGGAGTTCAAGTCTGCCAATG
ACGTTTCCCCTACCATTTTCCTTTCTATCTTGGCTGCAAATAAGGCTATGTTTAATCCAATGGAAGGATTATAATACTTTTACGCA
CTAGCTATCTATGGAATGACCCGAGAGAGCAAAATGATGGAGCATCAAGGATCACATCTGATGTGGGGATGATATGAGCTTATTGC
TAAGAACTCTGTTCTTCTTCCCACCTACTCATTGACACGAATCTAGGCTGCTGTTTCATGCCTGATCTTGGGTCATTTGTGAGATT
CAACATGTTACTTTGATAGATCCATCATCACCCGATTGTTTGTTATCAGCAATGATGAGCTGCAACAACATCAACAGAAGCCTGAA
AACAGAGAGATCATAACAGCGAACAACAAAAACTCAAATCTTTGAAGAGAAACAGATACAAGACACGAAGTCACTTTCTTATTGTT
GACCATCCTTACGATGATTCTGAGAAATGAATTTTCAAGCTCTTATCCGATTAGAATCAATGGAAGTCTAAGAAACCAAGAACAAA
GAAAGAAAGAGTTGGTTCTTCAAAGATCAGTTTCCAACATTCAACTTCTTTGTATGATAGTGTCGAGCCAGATGCGGAGGCAATTG
CACAGATGAAAGATATATATACACAACAGCTGCGTTTAGACCGGTGAATATTCCATTGTTGGAGATAATGGACCAGATGAACTTTA
TGAAGACTATTATAACTTTCTACGTATCATTTTCGGACCCAATAGTCTATTTGGAGTTGTTAGTGTGTGCTTTTTCTAAGTATATT
AACTTTGGTTTAAACCGTCTGTTTAATTAATGCAAGTCATTCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB03046 unnamed protein product [Arabidopsis thaliana] | 260 | 2e-020 |
| AAO42279 unknown protein [Arabidopsis thaliana] | 260 | 2e-020 |
| NP_188770 transcription factor bHLH87 [Arabidopsis thaliana] | 260 | 2e-020 |
| XP_002883298 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] | 248 | 6e-019 |
| ABK78689 cysteine proteinase inhibitor [Brassica rapa] | 158 | 2e-008 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8S3D2 Transcription factor bHLH87 | 260 | 1e-021 |
| Q8H0X6 Cysteine proteinase inhibitor 6 | 137 | 2e-007 |
| Q0JNR2 Cysteine proteinase inhibitor 12 | 126 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A0T2P2 Cysteine proteinase inhibitor | 158 | 1e-008 |
| B0YGH3 Proteinase inhibitor | 154 | 3e-008 |
| Q5ZFX8 Cysteine protease inhibitor | 151 | 7e-008 |
| Q5ZFX1 Cysteine protease inhibitor | 148 | 2e-007 |
| Q5ZFW6 Cysteine protease inhibitor | 147 | 2e-007 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G21330.1 basic helix-loop-helix (bHLH) family protein | 260 | 9e-023 |
| AT3G12490.2 cysteine protease inhibitor, putative / cystatin, putative | 137 | 2e-008 |
| AT3G12490.1 cysteine protease inhibitor, putative / cystatin, putative | 137 | 2e-008 |
| AT5G05110.1 cysteine protease inhibitor, putative / cystatin, putative | 117 | 4e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
