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Information for unigene UN02819

FASTA Sequence
Unigene ID: UN02819Length: 1606  SNP
GGAGGGTTTATATTTATTTTGCCGCGGCGTCTCCGTTATCTTCTCTTTCTGTTCCAATCTTTCCCGTCGGTCGGAGTTTTATCGCA
ATACGAATCCCAAATGGCGTCGGAGAAGAAGCTATCGAACCCAATGAGGGACATAAAAGTGCAGAAGCTGGTGCTCAACATCTCCG
TCGGTGAGAGTGGAGATCGTCTCACCAGAGCCTCCAAGGTGTTGGAACAATTGAGTGGCCAGACTCCTGTTTTCTCCAAGGCACGG
TACACTGTTCGTTCTTTCGGTATCAGACGTAACGAGAAGATTGCTTGCTACGTTACTGTCAGGGGAGACAAGGCAATGCAGCTCCT
TGAGAGTGGACTCAAGGTTAAAGAGTATGAGCTCTTGAGAAGAAACTTTAGCGACACTGGTTGCTTCGGTTTTGGTATTCAGGAGC
ATATTGATTTGGGTATTAAGTATGACCCGTCGACTGGAATCTACGGTATGGATTTCTATGTTGTTCTTGAGCGTCCTGGTTACCGT
GTGGCACGTCGTAGAAGATGCAAGGCTCGTGTTGGAATCCAGCACAGAGTGACTAAAGATGATGCTATGAAATGGTTTCAAGTGAA
ATATGAAGGAGTCATTCTCAACAAGTCTCAGAACATTACTGGCTAAAGAAATATTGTCTGAAACATATATGCTCGAACCGGGTTTT
CTCAGTTTTGTTTTGTTCTTTAGACATTTGAATTTTCTTTATAGATATTGCCTATCTACAATGATTACCATCAATAAATATGATTC
TACATACGCCGTGGATAACCAAAAAGGAAACTTTCTTCCACTGCACGAACCACTGAGATTAGTTCCAATGTGAAGAGATCGTTCAC
TGTCATGTCTCCAGCAAGATCTGAGCTAACACCGGGAGAATAATCTCTTCTTGTCGGTTTGAGTATAACGAATCTACAGAGAGGAC
ACTGTCCTTTGGTCTTCAACCATTGAACTATACACTCCTCATGAAACATATGTTTGCACGGAGTGAGCATCACTGTTTCCTTGGGC
TCAAAGTCGTCTAAACACACTGTGCATCTCTTCTCATCGTCTTCTTCACCGGAACAACCTTGAGGGTTTCTTGAATTTCCGCTTCC
CTGGTTCTTGTTTCTGTAGTATAAGCTCAGGTTTCTGAGAAGCTGGCTTTTTGGGACAGGGTTGTATATCTGTTTTGTTAGATGTT
TCAGAACATGGTCCTTTTCTCTGTCTTGTGATGATGCTGATCTTGAGTTGCTCTCGGTTCTATCACGTTGGTTGTGAACGGCTTGT
CTTAGTGCCTCGAGGTGTTGCCTCCGCAGGTTATTGCCGGTTCGGATTGGAATCTGATGTGGAGTATGTGATGGTGGTACATAATC
TACGTTTGATGAAGCTGTTCTTGAGTAAGTGGATGGAGGAGGATCATCGAGCAAACCCCTATTAACTATCAAATCACTCCTGGACC
AAGCGTTCCGTGTAGAGAAAGAAGGAATTGGCCGACCCAAGGATCTTGTAACCAAGCCATATCTATTGGATTGATTTGGAGCATCA
AAATAGCTATTTCCGGAGTTGTTGTTCATAGCTGAATGAATGATCTTTTGTTTGTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850376 60S ribosomal protein L11-1 [Arabidopsis thaliana]9315e-098
CAA57395 ribosomal protein L16 [Arabidopsis thaliana]9281e-097
NP_191429 60S ribosomal protein L11-2 [Arabidopsis thaliana]9272e-097
XP_002876475 60S ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata]9272e-097
XP_002880003 60S ribosomal protein L11 [Arabidopsis lyrata subsp. lyrata]9262e-097

Swiss-Prot top hits (Blast detail)Scoree value
P42795 60S ribosomal protein L11-19312e-099
P42794 60S ribosomal protein L11-29277e-099
P46287 60S ribosomal protein L119017e-096
A2YDY2 60S ribosomal protein L118749e-093
Q0DK10 60S ribosomal protein L118749e-093

TrEMBL top hits (Blast detail)Scoree value
Q0WQZ1 60S ribosomal protein L11B9314e-098
B9R7U8 60S ribosomal protein L11, putative9072e-095
Q8GTE2 Ribosomal protein RL59054e-095
Q676Z7 60S ribosomal protein L11 (Fragment)8982e-094
A9PBE6 Predicted protein8973e-094

Arabidopsis top hits (Blast detail)Scoree value
AT2G42740.1 RPL16A; structural constituent of ribosome9321e-100
AT3G58700.1 60S ribosomal protein L11 (RPL11B)9284e-100
AT4G18730.1 RPL16B; structural constituent of ribosome9284e-100
AT5G45775.2 60S ribosomal protein L11 (RPL11D)9284e-100
AT5G45775.1 60S ribosomal protein L11 (RPL11D)8792e-094

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
112  25%
 
101  13%
 
211  13%
 
122  25%

Unigene MembersMember information