Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05231

FASTA Sequence
Unigene ID: UN05231Length: 820 SSR 
GGAGGAACTCTCTTCCTTCAACAAAAAAAAAAAACACACCAATAGAGATCCAAGAAAGGAGAGGCCATTAAAGAGAGAGAGAGAGA
AATGGGAAGGTCACCTTGTTGCGAGAAAGCTCACATGAACAAAGGAGCTTGGACTAAAGAAGAAGATCATCTTCTCGTTGATTACA
TCCGCAAACACGGCGAAGGTTGCTGGCGATCTCTCCCTCGAGCCGCCGGATTACAAAGATGTGGTAAGAGTTGTAGGTTGAGATGG
ATGAATTATCTAAGACCAGATCTCAAGAGAGGTAATTTCACTGAGGAAGAAGACGAACTCATCATCAAACTCCATAGCTTACTCGG
TAACAAATGGTCGTTGATTGCTGGGAGATTAGCAGGAAGAACAGACAACGAGATCAAAAACTATTGGAACACTCACATCAAGAGGA
AGCTTGTCAGCCGTGGGATTGATCCAAACACCCATCGTCCGATCAACGTAATCCCTCCTTCAAAAACAACAACACCATCACTTCTA
AACGACGAGCCTGTACAATTCGATTTGGCCGGACCGGATCAGCATCAGACGGTTAAACCGGAACCGATGGCGCTAGACCGGGAAGA
GGTTAATAATGATATCAACAATAATAACTCCACGAGCAGTGGAACGACGTCGGACGACGATTGTGTACTCATAATGAGTCCTGTCG
TAATTGTCGTGTTTCGGATGCTCGAACCATCTGGGAATCGAAAATTCTTTAGGAATATTTTATATATTAGTTAATTTGTATTTTTG
TTTTGTTTTGTTATGTTTCTTCTTGTAATGAATGCATCAAGTAACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34375 unnamed protein product [Thellungiella halophila]8201e-085
NP_564176 transcription factor MYB3 [Arabidopsis thaliana]7582e-078
XP_002890523 hypothetical protein ARALYDRAFT_472503 [Arabidopsis lyrata subsp. lyrata]7403e-076
AAN28270 myb-like transcription factor 1 [Gossypium hirsutum]6784e-069
XP_002325546 predicted protein [Populus trichocarpa]6767e-069

Swiss-Prot top hits (Blast detail)Scoree value
Q9S9K9 Transcription factor MYB37581e-079
P81395 Myb-related protein 3306737e-070
Q9SZP1 Transcription repressor MYB46575e-068
P81393 Myb-related protein 3086513e-067
Q38851 Transcription repressor MYB66494e-067

TrEMBL top hits (Blast detail)Scoree value
Q43525 Transcription factor6783e-069
Q8H271 Myb-like transcription factor 16783e-069
B9IQH2 Predicted protein6765e-069
B9T8B7 R2r3-myb transcription factor, putative6756e-069
Q43436 MYB16731e-068

Arabidopsis top hits (Blast detail)Scoree value
AT1G22640.1 MYB3 (MYB DOMAIN PROTEIN 3); DNA binding / transcription factor7589e-081
AT4G38620.1 MYB4; DNA binding / transcription factor6575e-069
AT4G09460.1 ATMYB6; DNA binding / transcription factor6494e-068
AT4G34990.1 AtMYB32 (myb domain protein 32); DNA binding / transcription factor6432e-067
AT2G16720.1 MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / transcription factor6404e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
102  67%

Unigene MembersMember information