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Information for unigene UN05294

FASTA Sequence
Unigene ID: UN05294Length: 1547 SSRSNP
GGATCTCCTACAACCATCTGTCTCTCGGTGTGTTCTGTGATCCTCTCTCTCTCTCCACAAACCTAAAATCTCGGGACTTTCGATCT
CAGGGGAAGAGGATCGTGAAAGAGAGGACTCGCGATGACGATTGGTGCGACGCTTCTCGAATCGAATAAGGCTAAATGCTATGCTC
CGAGCTTCATCACCGTCAATCTCTGTCTTGCTCTTATCGATGGCGCTCTCGCTTTCATCGCATTCCTTCAGTTAACTCGGTTTCAC
CGGCGGGATAAACGAGTTGGGTGGACACGACAAAAAGTGCTTCATCTTATGATTGGCTCCTCAAACACTGGTTCTCTCATCTATTT
CGTGGCTGCCATTATAGCAACGTGCACAAGGTGGCATCATTGGTCCACCGCTTTAGGTTTTCTGCTTATGGCGTTTCCCAAAATTC
TGTTTCTTGCAACTTTTCTCCTGCTCCTCTCTTTCTGGGTAGATGTTTGCCATCAGGGAAATGGAGAAGAGGAAGATGAGGATGAT
GAAGAAAGCAACAGCATCCAGCAAGGGTTGCTTGAAAAAACCAAGATCAAACCAGGCTCTTCGAGTGCAAGTGACCGCAGAAAGTG
TTGCTCTTTCCATGAGATTCATCTCGGCACTAGGCAGAAGTTTGTTGTTGCGGCGGTTGTTCTTGTGTTCATCTTGATGATATCAT
TTGCTATCCTTATCTGGATTGCTTCCGGTGATAACTCTGCTGATCCTTCACTATTGGCTGAGGTGTATGTAGATATTTTCGCTTCA
ATAATCCTAATCACAGGAGGAGGAATATGTTTCTATGGAATGCGTCTGCTCTTTAATCTAAGGAAGGTAAGGTCCGAACAAGTTTC
AGCAGAGATGAGAAAGGTATCAGGTTTAGCAGGCGTCTCAGTTGTATGCTTCACCGTCAGCTCTTTACTCGCTCTTCTCACACACA
TTCCGCTTTTCTATCATTGGAACCCAAGCAAACTACATGGTGTCAGGGCATTGGTTCTTCTGATCATATACTATTTCATAGGTTCG
ACCGTACCATTGGCTTTCGTTTTGTGGGTTTTGAGGGAGTTACCTCCTCAAGAGATTGTGAGTAGACGAGAAGAACAGAGAAGAAT
CACTTATGTCAACTACGAAAGTGTTGCAAGGCAGACTCAGCAGCAGCAGTGGACTGCCACAACCGTTTTTAAGAATCAGGTTTCAA
AGGCAAGTCCAATATGACCCCAAATAAACATATATCATAGTTGATAGCATGGAGTGAAAATCCGCCAAAGTTCCTCTCTTGTTACC
AGGAAAAGAAAAAAACCTCGTGGAGTTGCGTGATAGTTGTAGACCAAACAAAGGTGTGTCGTGGTAGAAGGAAACGAAAGTAGAAA
CAACTCGTTTTTTTCTATCTCTCTCTCTTTTTTGGAAGACAACAGTTTGTTTACAAAAAAGATAGAATGGAGGTCCTGTAAATATT
TTTTTCTTTGAACGACAGATTCTTTATTTTTTAGTTTTAGTTGCATGAAATGTGATCTTGTGGATACATATCTTTTACTTATTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850719 uncharacterized protein [Arabidopsis thaliana]16288e-179
XP_002876488 hypothetical protein ARALYDRAFT_486377 [Arabidopsis lyrata subsp. lyrata]16054e-176
NP_567077 uncharacterized protein [Arabidopsis thaliana]15973e-175
NP_001030892 uncharacterized protein [Arabidopsis thaliana]14827e-162
CAB86937 putative protein [Arabidopsis thaliana]13796e-150

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q3EAH7 AT3G59090 protein16285e-179
Q945Q2 AT3g59090/F17J16_14015972e-175
Q2V3N2 AT3G59090 protein14824e-162
Q9LYS7 Putative uncharacterized protein F17J16_14013875e-151
B9H827 Predicted protein10237e-109

Arabidopsis top hits (Blast detail)Scoree value
AT3G59090.1 EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding (TAIR:AT4G21790.1); Has 115 Blast hits to 115 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).16292e-181
AT3G59090.2 EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding (TAIR:AT4G21790.1); Has 115 Blast hits to 115 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).15971e-177
AT3G59090.3 LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: TOM1 (TOBAMOVIRUS MULTIPLICATION 1); protein binding (TAIR:AT4G21790.1); Has 115 Blast hits to 115 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 108; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).14832e-164

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  25%
 
63  38%
 
212  25%
 
201  13%

Unigene MembersMember information