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Information for unigene UN05599

FASTA Sequence
Unigene ID: UN05599Length: 1503 SSR 
GGGAGTGTATCCTCTTGCTGTCATTCTCTCACCAACAAGGGAATTGGCATGCCAGATACATGATGAAGCCAGAAAGTTCTCCTATC
AAACTGGTGTGAAAGTTGTGGTTGCTTATGCAGGAACACCAGTCAACCAACAGATACGGGAGCTTGAAAGAGGAGTTGATATTCTT
GTTGCAACTCCTGGGAGATTAAATGATTTGCTTGAGAGAGGTAGAGTCTCACTACAGATGGTAAAATACTTAGCACTCGATGAGGC
TGACAGGATGCTGGACATGGGTTTTGAACCGCAAATCAGGAAGATCGTTCAGCAGATGGATATGCCTCCTCCTGGTGTCCGGCAGA
CAATGCTATTCAGTGCTACATTTCCTAGAGAGATACAGAGACTTGCATCTGATTTTCTTTCTAATTACGTATTTCTGGCTGTTGGG
AGAGTGGGTTCAAGTACGGATTTGATTGTCCAAAGGGTAGAGTTTGTCCACGACTCTGACAAAAGAAGCCATCTGATGGACCTTCT
TCATGCTCAGAGGGAGAATGGTAACCAAGGAAAGCCAGCTTTGACTCTAGTATTTGTGGAGACAAAGAAGGGGGCTGACTCTTTGG
AGAATTGGTTGTGCATGAACGGGTTCCCAGCAACGACCATCCACGGTGATAGGTCACAGCAGGAAAGAGAAGTGGCACTGAGATCA
TTCAAGACTGGGCGGACACCTATTTTGGTTGTAACTGATGTGGCAGCACGTGGTCTTGACATTCCACACGTGGCTCATGTGGTCAA
CTTTGATCTACCAAACGACATCGATGACTATGTCCACCGTATCGGACGAACAGGGCGTGCAGGCAATTCAGGACTAGCAACTGCTT
TCTTCAATGACAACAACACATCAATGGCCAAGCCACTCGCTGAGCTTATGCAAGAAGCAAACCAGGAGGTCCCTGACTGGCTGAGT
CGGTATGCATCTCGTGCTTCATTTGGAGGTGGAAAGAACCGACGGTCTGGTGGGCGGTTTGGTGGCCGTGACTTCAGGAGAGAATC
GTTTGGCCAAGGAGGAGGCGGTGGTGGTGGCTACTATGGTGGTGGTGGTGGTGGATATGGAGCCGTTCCCGGTGGTGGATATGGAG
CAATGCCTGGTGGATATGGAAACGTACCAGGTGGTGGATATGGGGCCGTTCCTGGTGGTTATGTACCATACGGTAGAGGCGGTGGT
GCTTACTACGGTGGAGGATATGGAGCCGTTCCTAACCAAGGCTACGGCCCTGGAGTGGCAAGTGCTTGGGACTAAGTTGTTGACTC
CAATTCTTCAAAAACGAACTATATCCTCTCTTATCTCTATTGTTTTACTAATAGAGAGCATCGTATGTGTATGTTTGCTCTCTAGA
TGGTTATTTATGTAGACACGAGTGAGTCTTCACTTGTGCATGTGAAAGAAGCCAAAAAAACTCCTAGTCGACTATTATTTTCACGA
GTTCTGTAGTCCTTGGATCAATATAAAACATAACTTTTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876468 hypothetical protein ARALYDRAFT_486308 [Arabidopsis lyrata subsp. lyrata]21072e-234
NP_191416 DEAD-box ATP-dependent RNA helicase 52 [Arabidopsis thaliana]21063e-234
XP_002879990 hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp. lyrata]17595e-194
NP_181780 DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana]17452e-192
AAO42134 putative DEAD/DEAH box RNA helicase [Arabidopsis thaliana]17424e-192

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2F9 DEAD-box ATP-dependent RNA helicase 5221061e-235
Q84W89 DEAD-box ATP-dependent RNA helicase 3717458e-194
Q8LA13 DEAD-box ATP-dependent RNA helicase 1116571e-183
Q75HJ0 DEAD-box ATP-dependent RNA helicase 3715952e-176
Q6Z4K6 DEAD-box ATP-dependent RNA helicase 52B15925e-176

TrEMBL top hits (Blast detail)Scoree value
B9GY92 Predicted protein16482e-181
B9SYU7 Dead box ATP-dependent RNA helicase, putative16213e-178
B9F6K1 Putative uncharacterized protein15953e-175
B8B879 Putative uncharacterized protein15928e-175
B9FW25 Putative uncharacterized protein15928e-175

Arabidopsis top hits (Blast detail)Scoree value
AT3G58570.1 DEAD box RNA helicase, putative21078e-237
AT2G42520.1 DEAD box RNA helicase, putative17457e-195
AT3G58510.1 DEAD box RNA helicase, putative (RH11)16571e-184
AT3G58510.2 DEAD box RNA helicase, putative (RH11)16571e-184
AT3G58510.3 DEAD box RNA helicase, putative (RH11)16571e-184

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
112  67%

Unigene MembersMember information