Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN05612

FASTA Sequence
Unigene ID: UN05612Length: 1105 SSR 
TCTCTCTCTCTCTTAAAATTAGATTTCAAAGGTCTTACCTTTTGGTCTTCCTCGTATCTCGCAGCCTGGAGGGCTTCCGACATTCT
CAGCGATTATGCTCGAATCCGTGAGTTTCTAAGGAAGAGGAAGGGACATAAAAGAGCAAGTCTTTGGAGTTAGAGTAAGACTCTTG
TGTGTTGTGTTGGGATGGATCAAATAGTTTCAGGAGAAGAAGAAGAAGAGCTTGGTGTTGACATTGAAGAAGGTGTTGGCTTCAAT
GATATAACGACCAATCAAGAAGATGTTGTTCTGGATCAGGTTTGGAACGGGCGTTTGAGTTATGAACACAGGTCTGAAAATACCAC
TGATGACGATGAGGATGGTGGTCTGATAAACCCCTTGATTCAAGATGGGAAGAGGAGAGAGAGAAGCAGCCAAAGTCTAGACCTTT
CCGATAGAAAATTCGATAGCGTCAAGGTTAAGAAGACGAGGAAGCCTTCAAAGTCTCCTAGACCTCCTGAAGGTCCTTTGTTGACT
GCAAACGACCAGAAGCTGATGAGGGAGATCGCAGAGCTCGCTATGAGGAAGCGTGCTAGGATTGAACGTATGAGAAGAATGAAAGC
AGCAAAGTCTTCTTCTCCTTGCAGTAGCATTTTGGCTATGATTGTCACTGTTATTTTTTTCGCCTTTTTTATCTTTCAAGGGTTCT
TCACAAGCAATGCAAGTTTGAGTTCAGACAATTTTCCTGCACCAGACAATAACCGTATGGTCTCTGTTCAGTTTTACAATGAGTTT
GCTCCTCGTGAGAGAATAGATCCTAGCCCTACTACGACGTTCAGGTATAAGAGAGTTTCGGGTGCAGACAATGAAGAGAACACAAG
AGAAGTTAACAGATGAGATAGCTCTCTTGGGATTCTTGTAATGTAAACCAAAAACAGTACTTTTTTGTTTGTTTTGTACTTAAATT
CTTGACATCATTGTATTGTTCTTTTTGCTCTGTTATTTGTGCTCACATGTGTGTCTTTGCGTGTATATATATGTTGTTATGGATGA
ACCTCTAGCCTTCTTTAAGGTTAGGCTTTGTACAGCAACCGAGTTTTATCACCTAAAACAATAATGCTGATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192105 uncharacterized protein [Arabidopsis thaliana]8231e-085
XP_002872867 hypothetical protein ARALYDRAFT_490381 [Arabidopsis lyrata subsp. lyrata]7899e-082
XP_002889398 hypothetical protein ARALYDRAFT_887378 [Arabidopsis lyrata subsp. lyrata]5551e-054
NP_171740 uncharacterized protein [Arabidopsis thaliana]5381e-052
BAC42457 unknown protein [Arabidopsis thaliana]3605e-032

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SYJ3 At4g019608237e-086
Q9FZ23 T6A9.7 protein5423e-053
Q8GY74 At1g023803604e-032
B9RNA8 Putative uncharacterized protein3012e-025
B9I9G4 Predicted protein2539e-020

Arabidopsis top hits (Blast detail)Scoree value
AT4G01960.1 unknown protein8243e-088
AT1G02380.1 unknown protein3647e-035
AT3G17120.1 unknown protein2161e-017
AT3G17120.2 unknown protein2161e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
111  33%

Unigene MembersMember information