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Information for unigene UN06284
FASTA Sequence |
Unigene ID: UN06284 | Length: 1332 |
SSR | | GGACACTTCTTCTTTTATCTCTCTCTACCTTTGTTTCTCTCATTAGCTATTGCAGGGTTTTTGATCAGCTTGAAAATATCCATAGC
CATGGACACAGCTAAATGGCCTCGGGAATATATTGTGACGCCAATGAACGAGACATGCTTGAGACAGTCAAATCCTGCCGCTGCTG
CTGCTGCTGCTGCTGCTGCTCCAGTGGAGAAGAAGGCAAAACCGGAGAAAGACCAGGCTTTGAACTGTCCAAGATGCAACTCCCTA
AACACCAAGTTCTGTTACTACAACAACTACAGCCTCACTCAGCCCAGGTACTTCTGTAAAGACTGCAAGAGATATTGGACCCAAGG
TGGCTCCCTCAGGAACATACCCATCGGCGGTGGCATCCGGAAGAACAAGAGATCTTCCTCTTCTTCCAATTCCAGCTCCTCTTCCT
CTTCAAAGAAAACTCTTTTTGCCGACAACAAAACGCCACCACCACTTCAACAGCTAAACCTTAAGACTGCTGAGAATAACCACGTG
GTAGCGGCGGCTAAAGTTCAAGAGTTGGCGTACTCTCATGGTCTTGGTAACGCCCACGAGGCCAAAGATCTCAATTCAGCGTTTTC
TCAAGGGTTTGGGATTGGTCATCATCATCATCAAAGTATTCCTGAGTTTCTACAAGTAGCGCCCAGCAGTGCACTTGTATCAACCT
CATCGGCTTTGGAGCTTTTAGGGATCTCTAATTCCTCGGCCACCTCCTCTAACTCACACCCTACTTTCGTGACTTATCCTAACGTT
CATGATTCGTCGGTGTTCACCGCAGCATCACCTGGATTTGGTCTGAGTTACCCACAGTTTCAAGAGTTCATGAGACCACCTTTGGG
GTTCTCTCTTGATGGTGGGGATCCTATACATCAAGAAGAGGGGTCCAGTGGCACTGACATTGGAAGGCCTTTGCTGCTTTTTGAGA
GCCTGAAACTTCATGTTTCATCATCAAGCACCAATAGTGGTGGTGCCAATGGGAATGATCATGAGCGTGAGAAAGAAGAAGGAGAA
GCTGACAATTCTGTTGGGTTTTGGAATGGCATGCTAAGTGCTGGTGACTCGGCTGCCTCTGCTGGTGGACCATGGCAATAATTATA
GTCAAGGAGAGTTTCTTATAAGAGAAAAAAAAAGAACTAAAGAAAAGAGAAGCGTGCAGTTTAAATTGTTCATCCAAATTTTAGAA
GATGAAGGTTAACTAACTACCCTCTGGGTGTTTACTATCTTTAACTTGTTGGGTTGGGGATGAATGGCTTTGTATTATTATCAATC
CCAGTTAATTATCTAACTGTTATTGATTATGTTTGTTTCAGC
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GenBank top hits (Blast detail) | Score | e value |
XP_002887870 hypothetical protein ARALYDRAFT_474883 [Arabidopsis lyrata subsp. lyrata] | 1250 | 4e-135 |
AAM61461 zinc finger protein, putative [Arabidopsis thaliana] | 1158 | 2e-124 |
NP_564836 Dof zinc finger protein DOF1.8 [Arabidopsis thaliana] | 1151 | 1e-123 |
AAF19678 F1N19.19 [Arabidopsis thaliana] | 1086 | 4e-116 |
NP_567693 Dof zinc finger protein DOF4.6 [Arabidopsis thaliana] | 517 | 4e-050 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q84JQ8 Dof zinc finger protein DOF1.8 | 1151 | 5e-125 |
Q8LAP8 Dof zinc finger protein DOF4.6 | 517 | 2e-051 |
Q9ZPY0 Dof zinc finger protein DOF2.5 | 392 | 6e-037 |
Q9FM03 Dof zinc finger protein DOF5.6 | 340 | 6e-031 |
Q9ZV33 Dof zinc finger protein DOF2.2 | 321 | 1e-028 |
TrEMBL top hits (Blast detail) | Score | e value |
B9DGH2 AT4G24060 protein | 517 | 3e-050 |
B9RYR1 Zinc finger protein, putative | 462 | 7e-044 |
O82027 Dof zinc finger protein (Fragment) | 385 | 6e-035 |
B8AGF5 Putative uncharacterized protein | 384 | 8e-035 |
B9F1L8 Putative uncharacterized protein | 383 | 1e-034 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G64620.1 Dof-type zinc finger domain-containing protein | 1151 | 5e-126 |
AT4G24060.1 Dof-type zinc finger domain-containing protein | 517 | 2e-052 |
AT2G46590.1 DAG2 (DOF AFFECTING GERMINATION 2); DNA binding / transcription factor | 392 | 5e-038 |
AT2G46590.2 DAG2 (DOF AFFECTING GERMINATION 2); DNA binding / transcription factor | 392 | 5e-038 |
AT5G62940.1 Dof-type zinc finger domain-containing protein | 340 | 5e-032 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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