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Information for unigene UN06927

FASTA Sequence
Unigene ID: UN06927Length: 706 SSR 
GGGACTCGCGAGCTCTTCGTCTCCTCTGTTACGATCTACCTGCTCTCTCTCTCTCTCTCACAGCGCAAAGTGTGAAGCTTTTGGCG
GGAAAATGTCGGGTAAAGGAGCAAAGGGTCTGATTATGGGGAAACCCAGCGGTAACGAGAAAGACAAGGACAAGAAGAAACAACCC
ATCACCCGTTCTGCTCGGGCTGGTCTTCAATTCCCTGTAGGAAGGGTGCATCGGCTGTTGAAGACTAGATCCACTGCTCACGGAAG
AGTCGGAGCAACTGCAGCTGTTTACACAGCGGCGATACTTGAGTATCTGACCGCAGAAGTCTTGGAGCTGGCTGGTAACGCGAGCA
AGGACCTCAAGGTGAAACGTATCTCCCCCAGGCACTTGCAGCTTGCGATTCGTGGAGATGAAGAGCTTGATACTCTCATCAAAGGA
ACTATAGCTGGTGGTGGTGTCATCCCTCACATCCACAAGTCTCTCATCAACAAATCCGCCAAGGAATAGATCTTTCTTTCACCGCT
TTGCGAGAGAGTCTTGTGTTTGGTTAAGAAGACTGCTAGGAGTGCTCTTTGTTTAGGATATGTTTGTTATTGTACTTTTCTCTATC
TGTATGCATATGTATTTGATGATTATCTAAACCCTTTTCTGACTACTGCCCTTTTGGTTTGTTCCTATCAATGTAACATAGCATAG
TTTCATCAAGCTCTTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175683 histone H2A protein 9 [Arabidopsis thaliana]6416e-065
XP_002885097 hypothetical protein ARALYDRAFT_341690 [Arabidopsis lyrata subsp. lyrata]6148e-062
XP_002529367 histone h2a, putative [Ricinus communis]5942e-059
XP_002285266 PREDICTED: hypothetical protein [Vitis vinifera]5897e-059
ABK22002 unknown [Picea sitchensis]5897e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9C944 Probable histone H2A variant 36413e-066
O23628 Histone H2A variant 15705e-058
Q8H7Y8 Probable histone H2A variant 15661e-057
Q8S857 Probable histone H2A variant 25544e-056
Q84MP7 Probable histone H2A variant 35383e-054

TrEMBL top hits (Blast detail)Scoree value
B9STP8 Histone H2A5941e-059
A5AKG7 Histone H2A5895e-059
A9NMZ1 Histone H2A5895e-059
C6T0M0 Histone H2A5886e-059
C6SYX1 Histone H2A5878e-059

Arabidopsis top hits (Blast detail)Scoree value
AT1G52740.1 HTA9 (HISTONE H2A PROTEIN 9); DNA binding6475e-068
AT3G54560.1 HTA11; DNA binding5714e-059
AT2G38810.1 HTA8 (HISTONE H2A 8); DNA binding5312e-054
AT2G38810.3 HTA8 (HISTONE H2A 8); DNA binding5312e-054
AT2G38810.2 HTA8 (HISTONE H2A 8); DNA binding5312e-054

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information