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Information for unigene UN06942
FASTA Sequence |
Unigene ID: UN06942 | Length: 1344 |
SSR | | CTTATGCTTCTCTTCTCTCTCATGACAAATAAAAGCAATTTCGTCGAATTGAAGAAAAACATATCTTCTTTTTTGTTTGTCTCTCT
GCTCATTTCACACCCAGTTTTAAACGGTAGCTGTTGTCCGATCTCTATCCATCCTCTAGTACTGTGTCTTCTTGTAAAGCGGTCTC
TGTTTTTAGATTCACACCCTCTTTTTTTTTGTTCTTTCTCTTGACTTGTGTAAAACCCTGAGAACAAGAAGTGTATAAACAAAAAT
CTTTTCAAAAAAAAAGTGTATAAACAGAGATAGTTTGTCTATCTATATAATTGAGAAAAAAAAGAGTTTGGCTTTTAATATTGTTT
GTCGGTATGGGGCTTTGCTGGTCTTCTTCATCTAAATCTCCTTCAACAACAACAACAACACCTACCACTACTGGTAATATCAGTTC
AGGTCCGTTTAAGTCAACGACTACAGAAACATCAAGAAGTAACATATCTAGTACTAGTGGATTCTCTGCTGGAAGTGGTGGAGATG
CTTGCCCTGAGGGTCAGATACTTCCCATTCCGAACTTGAGGATATTCAGCCTTGCAGAACTTAGAGCTACAACCAGAAATTTCAAG
TCTGAGAACGTTCTTGGAGAAGGAGGGTTTGGGAAAGTCTTCAAAGGCTGGCTTGAAGAGAAAGGGCCTGGCAGTCACAGCACTGG
AACTGTGATTGCTGTCAAGAAACTTAACTCTGAAAGCTTCCAAGGATTTGAGGAATGGCAATGTGAGGTGAACTTTCTTGGGAGGG
TTTCTCATCCGAACCTGGTGAAGCTGTTGGGATACTGCTTGGAAGGTGACGAGTTGCTTCTGGTGTATGAGTTCATGCAGAAAGGA
AGCTTAGAGAATCATCTCTTCCGAAAGGGTTCTGTTGTTCAGCCGCTCTCATGGGAAATAAGGCTTAGGATTGCAATAGGAGCAGC
TAAAGGCTTAGCGTTTCTGCACGCTTCAGAGAAGCAAGTCATTTATAGAGACTTCAAAGCTTCTAACATTCTACTTGACAGTTCAT
TTAACGCAAAGCTATCAGATTTTGGATTGGCTAAGTTAGGTCCTTCTGCTAGTCAGTCTCACATCACAACACGGGTTATGGGTACA
CACGGTTATGCAGCTCCAGAGTATGTTGCTACAGGTCACTTGTATGTAAAGAGTGATAACTACGGGTTTGGAGTTGTTTTAGCTGA
GATCTTGACTGGTTTACACGCACTTGATCCTACCCGTCCCACCGGTCAACACAATCTAACAGACTGGATCAAGCCTCATCTCTCAG
AAAGAAGAAAACTGAGGAGGATAATGGACCCTCGTCTAGAAGGAAAGTACCCTT
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GenBank top hits (Blast detail) | Score | e value |
NP_973478 protein kinase domain-containing protein [Arabidopsis thaliana] | 1519 | 3e-166 |
NP_565408 protein kinase domain-containing protein [Arabidopsis thaliana] | 1507 | 7e-165 |
AAM61685 putative protein kinase [Arabidopsis thaliana] | 1503 | 2e-164 |
XP_002886105 hypothetical protein ARALYDRAFT_480605 [Arabidopsis lyrata subsp. lyrata] | 1499 | 6e-164 |
CBI37741 unnamed protein product [Vitis vinifera] | 1264 | 1e-136 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P27450 Probable serine/threonine-protein kinase Cx32, chloroplastic | 970 | 5e-104 |
P43293 Probable serine/threonine-protein kinase NAK | 965 | 2e-103 |
Q06548 Protein kinase APK1A, chloroplastic | 945 | 4e-101 |
O49840 Protein kinase 2B, chloroplastic | 945 | 4e-101 |
P46573 Protein kinase APK1B, chloroplastic | 938 | 3e-100 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9SII6 At2g17220/T23A1.8 | 1507 | 5e-165 |
Q8LEZ7 Putative uncharacterized protein | 1503 | 1e-164 |
B9SMD4 Serine/threonine-protein kinase cx32, putative | 1251 | 2e-135 |
B9MYZ9 Predicted protein (Fragment) | 1217 | 2e-131 |
B9HPX8 Predicted protein | 1214 | 4e-131 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G17220.2 protein kinase, putative | 1519 | 1e-168 |
AT2G17220.1 protein kinase, putative | 1507 | 3e-167 |
AT4G35600.1 CONNEXIN 32; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 970 | 5e-105 |
AT5G02290.1 NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 965 | 2e-104 |
AT5G02290.2 NAK; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 965 | 2e-104 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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