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Information for unigene UN06974

FASTA Sequence
Unigene ID: UN06974Length: 902 SSR 
GGGGGGTTCTCTCTGTCTTTTGATCTTCAAATCTCCTTTCCTCCATCCCACCAACTCTCTCTCTCTCTCTCTCTCTCTCTTGAGCT
CAATCATGGCTACCACCGCTGCAAACAAGACAATCAACGCCAAATTGGTGTTGCTTGGAGATGTTGGCGCTGGGAAATCGAGCCTT
GTGTTACGCTTTGTTAAAGATCAGTTTGTTGAGTTTCAGGAATCAACCATCGGTGCAGCTTTTTTCTCACAAACACTATCTGTCAA
CGATGCCACTGTCAAGTTTGAGATATGGGATACAGCAGGTCAGGAACGGTACCATAGTTTGGCTCCTATGTACTACAGGGGTGCTG
CTGCTGCTATCATTGTCTTTGACGTTACAAACCAAGCCTCGTTTGAGAGGGCAAAGAAATGGGTTCAGGAACTTCAGGCACAAGGT
AACGCTAATATGGTGATGGCCCTTGCTGGAAACAAATCTGATTTATTAGATGCAAGGAAAGTTTCCGCAGAGGTAATCAAATGCTT
CTGTCCTGACTGATTTTTCTAATTCTAATGTTTGGATATTGCTGTCAAGTTTAACGTGGAGATGTGTATGTAATAGCCTAATAGCT
GATCCATCATGTAGTTCAGCTTTATTTGTGTCTCACTGGTCACATTTGACAGGACAAAGCCGTTAGGTGAATCACAATGTACTTGA
TGGGCTCCCAACTAAAAAGACCCCACACACTCAAACAAATCACTGTGTAGCTTCTTGTATAGATAGATAGATAGCTGGCTGTCATC
AAGCATTTATACGTGCTTTTCTCTAGCCATCTTTGGAGAATGCTTTTATATGACTTGACTTATCCCGCTACCTTGTGTGTCTTTTT
GTTCATGTTTTGGTCTCTTATTAGTCTAGACAGTCTCGTTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867930 hypothetical protein ARALYDRAFT_492904 [Arabidopsis lyrata subsp. lyrata]6472e-065
NP_193699 Ras-related small GTP-binding family protein [Arabidopsis thaliana]6411e-064
2EFC Chain B, Ara7-GdpATVPS9A6411e-064
NP_199326 Ras-related protein RHA1 [Arabidopsis thaliana]6382e-064
XP_002321789 predicted protein [Populus trichocarpa]6338e-064

Swiss-Prot top hits (Blast detail)Scoree value
P31582 Ras-related protein RHA16381e-065
P31583 Ras-related protein RHN15582e-056
P29687 Ras-related protein Rab55492e-055
Q0IIG7 Ras-related protein Rab-5A4694e-046
P18066 Ras-related protein Rab-5A4694e-046

TrEMBL top hits (Blast detail)Scoree value
Q9SN68 AT4g19640/F24J7_1906417e-065
B9ICG5 Predicted protein6336e-064
A9P9C3 Putative uncharacterized protein6311e-063
B9RRP3 Putative uncharacterized protein6282e-063
B9NA46 Predicted protein6246e-063

Arabidopsis top hits (Blast detail)Scoree value
AT4G19640.1 ARA7; GTP binding6414e-067
AT5G45130.1 RHA1 (RAB HOMOLOG 1); GTP binding6389e-067
AT2G33870.1 ArRABA1h (Arabidopsis Rab GTPase homolog A1h); GTP binding3261e-030
AT5G60860.1 AtRABA1f (Arabidopsis Rab GTPase homolog A1f); GTP binding3261e-030
AT3G15060.1 AtRABA1g (Arabidopsis Rab GTPase homolog A1g); GTP binding3252e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
211  50%

Unigene MembersMember information