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Information for unigene UN07722
| FASTA Sequence |
| Unigene ID: UN07722 | Length: 1435 |
| SNP | CATCTGGGAGGTCTCATATAAATAAGAGGGAAGACTGTATTCTTTCTTTGAACATTCCATTGCAGGAGGCAACTAATAATAAAGAG
GTATATCTTGTTCTTCCTTCTCTGTTCCACTTCCTTTTATCATTTAGCCTGTTTCTTTTTAGACTTAAACTAGCTTCGATGCAAAC
ATAGCAAAGTGGAAACAACATACAAGAGGAGAAAAAAGTTACATAAGCTATCACCCTAACAGTGTCTCTTGAACACTTTTGTCTCA
CCTACAAGTAGAAGAAGAATCAACACCTCTAAGGAAAGACCTACGCCACCAAATCTGAAATGATTTACTGAGATTAGGACACTCAG
TCCCGTGCTTAGAGAACCACCTGAACCATTCCATGAACACTTGATACTGAAGCTTGGATGGCAGTGTTAAGAGCGTCTGCCCCATC
CCTTCTTCCACTTCCCTCATGTCTAATCCCTTCTTGCACCTTTGCAGCCACCCGAAATCTAGCAACATTGGCCTGAACCACATATC
TACAAGCCCCGCTCTTGCTTCTCCTCCGCACTGCACTCTCCTTTTCCCCATTGCAATAAACATTAACCCTGTTACTCTGCTTAATT
CGTACCTCACCATTGGCGACGCTTCCTCATGCATCTCCACTAGCGTTCTTTGCTTCCCCCATATCTCCACGAATTCCTCTGCTATC
TCCCGGTCTATCATGATTTCCAACAGCCAGTTTATGTTCTCCACTTCCCTCGATATACCTTCAATCAATGGCTTTCCGCTCTTGTT
ACAACTTCCCTTTCCAAACAGTTTAACAAGTGAATCCACACAGTACTTGCCTGCTTTATATATGTCTTCCTTGTTGATTTCAGGCT
GTTCTTTTTCGTACACTGAACTTTTGCAAAGAATACCTTTCACCAGAGATTTGAGCTCGTTTCTAGGAGGATTTGTATGGCTGCAA
GAGGTTATTGACCAAACAAGCTGCTTCGATAAGCTCTCTTGTGTGTTGTTCTCCGTCTCGTTAGAATTAAACCTTGCCAAAATTTC
AGCATCATCCAAGTTATAAACTGCAAGAACTCTCCTCAGTCTTTCCTCTTCGTCCTCTGTCCACGGAACAGCTTGGAGATATTCCA
GGCACGAAAAGACGGCTCTAGAGAATTTGATTCCAGCGGCTACCTCGAGGACATCAATGGCTCTGTAAACACCCATTTTCATGAGC
TTCTTGATAATGCCGTTGCCATTGGGTTCCTCAAACATGAGTTGTAGAGTTTCCTTAAAAACGGCAAGATTCTCCACATCGGAGAC
TTGCAAAGGTGAAGAAGACTTGTCAGCAGCAATCAAAGCAGCAGCGAACACATCCGAGTTGGCTGATAGAACCTCCGAGCTAAGCT
CCAGCACCAAAACTCCACCGTTCAGACTCACCCTAGCCGAATCTGAGACACTTGTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAM62951 unknown [Arabidopsis thaliana] | 1481 | 8e-162 |
| XP_002885891 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1472 | 8e-161 |
| NP_565358 putative PRLI-interacting factor [Arabidopsis thaliana] | 1471 | 1e-160 |
| BAC42262 putative f13j11 PRLI-interacting factor G [Arabidopsis thaliana] | 1465 | 6e-160 |
| XP_002526636 transcription regulator, putative [Ricinus communis] | 1122 | 3e-120 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LDX9 Putative uncharacterized protein | 1481 | 5e-162 |
| Q9SKH2 At2g13690 | 1471 | 8e-161 |
| Q7FM55 Putative f13j11 PRLI-interacting factor G | 1465 | 4e-160 |
| B9SKW7 Transcription regulator, putative | 1122 | 2e-120 |
| B9HEJ8 Predicted protein | 1077 | 4e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G13690.1 PRLI-interacting factor, putative | 1477 | 8e-164 |
| AT1G63850.1 PRLI-interacting factor-related | 568 | 2e-058 |
| AT5G60050.1 PRLI-interacting factor-related | 532 | 3e-054 |
| AT3G50780.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: PRLI-interacting factor-related (TAIR:AT1G63850.1); Has 173 Blast hits to 173 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | 531 | 4e-054 |
| AT4G10800.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: protein binding (TAIR:AT3G05675.2); Has 114 Blast hits to 114 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 136 | 3e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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