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Information for unigene UN08293
| FASTA Sequence |
| Unigene ID: UN08293 | Length: 1527 |
| SNP | GAGGCTCTTCTCTGGAGATCGCCTTCGTCGATTCCACTTGAGATATAGTAGCAGAAGCAACTGAAGAACAATGGGGATCATCGAAA
GGATTAAAGAAATTGAGGCCGAGATGGCTCGGACCCAGAAGAATAAAGCTACAGAGTATCATCTTGGTCAACTCAAGGCAAAGATT
GCAAAGCTCAGGACACAACTGTTGGAGCCTCCAAAAGGTGCTAGTGGAGGTGGGGAAGGTTTTGAAGTCACCAAGTATGGTCATGG
ACGTGTTGCACTTATAGGATTTCCAAGTGTTGGAAAGTCCACGCTTCTGACAATGTTAACTGGAACGCATTCAGAAGCAGCCTCAT
ATGAGTTTACAACACTTACGTGTATCCCTGGAGTAATTCACTACAATGACACGAAGATTCAGCTTCTTGATCTTCCTGGTATCATT
GAAGGTGCTTCTGAAGGAAAGGGGCGAGGAAGGCAGGTTATTGCTGTTGCAAAGTCTTCCGATCTTGTATTGATGGTTCTTGATGC
CTCAAAGAGTGAAGGCCACAGGCAAATTCTGACTAAGGAACTTGAGGCAGTGGGCTTGCGGCTAAACAAAAAGCCTCCACAGATAT
ACTTTAAGAAGAAAAAGACCGGTGGAATCTCTTTCAACACTACAGCACCCTTGACTCACATTGATGAGAAGCTATGTTATCAAATC
CTGCATGAATACAAAATCCACAATGCTGAGGTGCTATTCCGTGAGAATGCCACAGTGGATGACTTTATCGATGTCATTGAAGGCAA
TCGCAAATATATCAAGTGTGTGTATGTCTACAACAAAATTGATGTTGTTGGAATTGATGATGTGGATAGACTAGCACGGCAGCCAA
ATTCCATCGTTATTAGCTGTAATCTTAAGCTAAACTTAGACAGACTACTTGCAAGGATGTGGGACGAAATGGGACTTGTGAGAGTT
TACTCGAAGCCTCAGGGCCAGCAACCAGATTTCGATGAGCCTTTTGTCCTCTCATCTGATCGAGGTGGTTGCACGGTTGAAGACTT
CTGTAACCACGTCCACAGGACATTGGTGAAGGATATGAAGTATGCTCTTGTGTGGGGCACAAGCGCAAGGCACAATCCTCAGAATT
GTGGTCTTTCTCAGCATCTTGAAGACGAAGATGTTGTTCAGATTGTCAAGAAAAAGGAGAGAGACGAAGGAGGAAGAGGCCGGTTC
AAGTCACACTCTAATGCCCCTGCTAGAATTGCAGACCGAGAGAAGAAAGCTCCTCTTAAGCAATAAACTCAGCTGGTCAGTGATCC
CCATACACACATCTTCACCATCTTATTCATAGATGGTTTCACCTGAGTGGTATGATGTACTATGTTGTATTTCTGAATCATTTTTT
GCCTTCTCTTACCGTATAAGTTTTCAAACTAATTGTTTTTTCAAGAATACAATTAGTTCCTATTTACCTTTTCATAAACTATGTTT
TGATTTTTGTGAGCGAGTCTGCCCTCGAGTTCTTGTTATGTCCAAGTAAAAGCTAAAATGCATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173190 developmentally regulated G-protein 1 [Arabidopsis thaliana] | 2060 | 6e-229 |
| AAB53256 GTP-binding protein [Arabidopsis thaliana] | 2051 | 7e-228 |
| AAK44073 putative developmentally regulated GTP-binding protein [Arabidopsis thaliana] | 2051 | 7e-228 |
| XP_002890228 developmentally regulated G-protein 1 [Arabidopsis lyrata subsp. lyrata] | 2048 | 1e-227 |
| XP_002887445 hypothetical protein ARALYDRAFT_476401 [Arabidopsis lyrata subsp. lyrata] | 2009 | 5e-223 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P55039 Developmentally-regulated GTP-binding protein 2 | 1220 | 6e-133 |
| Q9QXB9 Developmentally-regulated GTP-binding protein 2 | 1218 | 1e-132 |
| P34280 Uncharacterized GTP-binding protein C02F5.3 | 1217 | 1e-132 |
| Q58D56 Developmentally-regulated GTP-binding protein 2 | 1213 | 4e-132 |
| Q54WT4 Developmentally-regulated GTP-binding protein 2 homolog | 1202 | 8e-131 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LQK0 At1g17470 | 2060 | 4e-229 |
| O04174 Developmentally regulated GTP binding protein | 2051 | 5e-228 |
| Q94K69 Putative developmentally regulated GTP-binding protein | 2051 | 5e-228 |
| Q9CAI1 Putative GTP-binding protein | 1993 | 2e-221 |
| C5WMP9 Putative uncharacterized protein Sb01g050020 | 1928 | 8e-214 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G17470.1 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 2061 | 2e-231 |
| AT1G17470.2 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 2061 | 2e-231 |
| AT1G72660.1 developmentally regulated GTP-binding protein, putative | 1994 | 1e-223 |
| AT1G72660.2 developmentally regulated GTP-binding protein, putative | 1994 | 1e-223 |
| AT1G72660.3 developmentally regulated GTP-binding protein, putative | 1994 | 1e-223 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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