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Information for unigene UN08820

FASTA Sequence
Unigene ID: UN08820Length: 688  SNP
GGGAAACTAAAACCCTAGCTTCTTCTCCTCTCATACTTTCTCTCTCAGAACTCGGAGGCGCCAAGATGACGGTTGAAGCAGTGAAC
CCTAAGGCGTACCCTTTAGCCGATTCTCAGCTAGCGATAACCATCCTCGATCTTGTCCAGCAAGCCACGAACTACAAACAGCTCAA
GAAAGGAGCTAATGAAGCTACCAAGACTTTGAACCGTGGTATCTCCGAGTTCGTGGTCATGGCTGCCGATGCTGAGCCTCTCGAGA
TTCTTCTCCATCTCCCTCTTCTCGCCGAAGACAAGAATGTGCCGTATGTGTTTGTGCCATCGAAACAAGCTCTTGGAAGAGCGTGT
GGTGTTACAAGGCCCGTGATTGCTTGTTCGGTTACATCAAACGACGCTAGCCAGTTGAAATCTCAGATTCAGCAGCTTAAGGATGC
TATCGAGAAGCTTCTCATCTAAGGTTTTTGTGTGGGGATATGAATGAATGATGAGTCTCCTCCATTTAATGGAGAAGGCTTTGAAG
TTTAGCTAATGAAGAAACGATGATTCTACTATGAGTTTTTGAAGTTTGTAATGTTTTTTTTTAAATTTCAGATTGTGTTACTGCCT
AATGCTTCTTTGAACAAGAACAATAATTTATAATTCCAGTTTCGTTTTATTTTTGATTAAAATAATTCCAGTTTCTTAAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97959 ribosomal protein L7Ae-like [Brassica rapa]6263e-063
XP_002872662 hypothetical protein ARALYDRAFT_490061 [Arabidopsis lyrata subsp. lyrata]6173e-062
XP_002873984 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [Arabidopsis lyrata subsp. lyrata]6112e-061
AAM64816 Ribosomal protein L7Ae-like [Arabidopsis thaliana]6093e-061
NP_197516 U4/U6 small nuclear ribonucleoprotein SNU13 [Arabidopsis thaliana]6075e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q5XH16 NHP2-like protein 15169e-052
Q6P8E9 NHP2-like protein 15169e-052
Q21568 NHP2-like protein 1 homolog5087e-051
Q3B8S0 NHP2-like protein 15052e-050
P55769 NHP2-like protein 15052e-050

TrEMBL top hits (Blast detail)Scoree value
A1YN00 Ribosomal protein L7Ae-like6262e-063
Q8LBE4 Ribosomal protein L7Ae-like6092e-061
Q94AF6 AT5g20160/F5O24_506073e-061
Q8LCC7 At4g223806056e-061
Q9SU26 AT4g12600/T1P17_1906021e-060

Arabidopsis top hits (Blast detail)Scoree value
AT5G20160.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6082e-063
AT4G22380.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6063e-063
AT4G12600.1 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein6037e-063
AT5G20160.2 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein4201e-041
AT5G20160.3 ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1923e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  7%
 
97  50%
 
62  14%
 
122  14%
 
102  14%

Unigene MembersMember information