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Information for unigene UN08972

FASTA Sequence
Unigene ID: UN08972Length: 634 SSR 
ATGTTTTCAAATTTGGAAAACTACTGGTCCATAACTTTTTGATTAGTCAATAAATACATAAAACAAGAGCTGAAGTAAAAATTCCA
ATTTATAACCAATAAACTGAAAATAAAGAACAGAAACAAACACAATATGTGAACTCACAATTACACACAAATGTAACCAGAACAAA
ATGTATCAAACACGTCTTTTTAAAACAATTATAATTATTGGGGGATAAAATACGATGCATACCGAAGACGGTCAACGGTGAATATC
ATCTCTTCATTCAAAGCAACAGCAAAGCATACCCAGACATTCTTCCAAAAGTCCTGAATCTTTTTCTTTTTTTCTTCTTCTTCTTC
TTCTTTTTCTTCTTTTCCGTAGCCTGGCTATTATGTGGTGGCGGATACTGGGGCGGAGGACCTTGAGGATATTGCGGCGGAGGATA
CCCTTGTGCAAGATATGGCTGACCGTATCCCTGCGATGGTGGAGGATAACTTGCCGGAGGATACCCTTGAGGAGGAGGAGTACCAA
CGGGATGTAGTTGATCTTGAGACATCTTTTTATCTGCTATGATCACATCTGAGGTGCTTTCCTTTATTTATATAGAAATGTCTGCT
CTTTTTTTCTCTGAACACTTAGAAATGGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB66922 putative protein [Arabidopsis thaliana]2518e-020
BAF00812 hypothetical protein [Arabidopsis thaliana]2518e-020
NP_001118805 uncharacterized protein [Arabidopsis thaliana]2518e-020
XP_001311120 calcium-binding protein [Trichomonas vaginalis G3]1674e-010
AAT48006 rhodopsin [Abraliopsis pacificus]1576e-009

Swiss-Prot top hits (Blast detail)Scoree value
Q8S8M0 UPF0467 protein At2g414201636e-011
P09241 Rhodopsin1422e-008
O16005 Rhodopsin1351e-007
P16537 Protein SPEC31313e-007

TrEMBL top hits (Blast detail)Scoree value
Q0WPY7 Putative uncharacterized protein At3g49840 (Fragment)2516e-020
Q9M2X4 Putative uncharacterized protein T16K5.1902516e-020
A2FA54 Calcium-binding protein, putative1673e-010
Q0D321 Rhodopsin (Fragment)1574e-009
Q6SSJ0 Rhodopsin (Fragment)1522e-008

Arabidopsis top hits (Blast detail)Scoree value
AT3G49845.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: XYPPX repeat (InterPro:IPR006031); Has 14038 Blast hits to 7746 proteins in 541 species: Archae - 8; Bacteria - 1083; Metazoa - 5225; Fungi - 1793; Plants - 3748; Viruses - 424; Other Eukaryotes - 1757 (source: NCBI BLink).2514e-022
AT5G67600.1 unknown protein1654e-012
AT2G41420.1 proline-rich family protein1636e-012
AT4G34150.1 C2 domain-containing protein1171e-006
AT1G79730.1 ELF7 (EARLY FLOWERING 7)1109e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
118  100%

Unigene MembersMember information