 |
Information for unigene UN09445
| FASTA Sequence |
| Unigene ID: UN09445 | Length: 2377 |
| SNP | GTGGTGGTCCGAGGCTCTTCATGGCGTCTCCGACGTCGGTCCCGGAGCTAAGTTTGGTGGTGCTTTCCCCGGTGCTACCACCTTCC
CTCAGGTCATCACCACAGCAGCTTCTTTCAACCAGTCTCTATGGGAAGAGATCGGACGGGTTGTGTCTGATGAGGCAAGAGCTATG
TACAATGGAGGCGTAGCCGGTTTGACGTATTGGAGCCCAAATGTAAATATACTGAGGGATCCACGGTGGGGCCGAGGCCAGGAAAC
TCCCGGAGAGGATCCTGTCGTCGCCGGAAAATACGCAGCCAGCTACGTCAGGGGACTTCAGGGTAACGGCGCCGGTAACCGCCTCA
AAGTTGCCGCATGTTGCAAACATTACACTGCTTATGATCTTGATGACTGGAATGGCGTCGACCGTTTCCACTTCAACGCCAAGGTC
AGCAAACAAGATTTAGAGGATACATACAATGTGCCATTTAAATCTTGTGTTTACGAGGGAAAGGTCGCGAGTGTCATGTGCTCATA
CAACCAAGTCAATGGAAAGCCAACTTGTGCTGATGAAAATCTATTAAAGAACACCATTCGTGGTCAATGGCGTCTCAACGGGTACA
TTGTATCAGATTGTGATTCTGTCGATGTTTTCTTCAACCAGCAACACTATACCACAACTCCGGAGGAAGCAGCTGCTGCTTCCATC
AAAGCTGGTTTGGATTTGGACTGCGGGCCGTTTTTGGCAATTTTCACTGAAGGAGCTGTGAAGAAAGGATTGTTGACGGAGAATGA
TGTCAATTTAGCGCTTGCTAATACTATAACGGTTCAGATGAGACTTGGTATGTTTGATGGTAATCTTGGACCTTATGCTAATCTTG
GACCTAGAGATGTTTGTACTCTAGCCCATAGACATTTAGCCCTTCAAGCGGCCCATCAAGGAATTGTGCTTCTCAAAAACTCTGGT
CGTTCTCTTCCACTCTCCCCTAGGCGTCACCGCACCATTGCCGTGATTGGACCCAACTCCGACGTCACTGAGACCATGATCGGAAA
CTATGCAGGGAAAGCTTGCACCTATACGACACCGTTACAAGGAATCGCAAGATATGCGAGAACACTTCACCAAGCTGGTTGTGCAG
GCGTGGCTTGCCGAGGGAACCAAGGATTCGGTGCGGCAGAGGCGGCTGCACGTGAAGCAGATGCGACGGTTCTTGTGATGGGATTG
GACCAGTCGATAGAGGCCGAGACACGAGATCGAACCGGGTTGCTGTTACCAGGTTACCAACAAGAGCTTGTTACACGAGTAGCTCA
AGCTTCTAAAGGTCCAGTCATTCTTGTGCTTATGAGTGGTGGCCCCATCGATGTTACCTTTGCTAAGAACAATCCACGTGTTGCTG
CCATCATCTGGGCCGGGTATCCGGGTCAAGCTGGTGGAGCTGCTATCGCCAATATAATCTTTGGTGCTGTTAACCCTGGAGGAAAA
CTACCTATGACATGGTATCCACAAGATTACGTAGCAAAAGTGCCAATGACGATAATGGCTATGAGAGCATATGGAAATTACCCAGG
AAGGACCTACAGATTCTACAAAGGTCCAGTGGTGTTTCCATTTGGGTTCGGTTTAAGTTACACTACCTTCACTCACAGTTTGGCCC
AAAGTCCATTAGCCCAACTATCAGTTTCATCCAAAAAATTCAACTCTGCCATTTTCAACTCGTCATCTGATTCCATCAAAGTGTCT
CATGCCAACTGTGGAACGTTTCCAAAAATGTCTCTCCATGTTGAAGTATCAAACACAGGTGAATTCGACGGAACCCACACGGTGTT
CGTCTTTGCCGAGCCGCCGAAAAACGGGATAAAAGGATTGGGTGTGAACAAACAATTGATAGCGTTTGAGAAGGTTCATGTCACGG
CAGGGGCAAAACGAACTGTTCAAGTTGATGTTGATGCTTGCAAGCATCTTGGTGTAGTAGATGAGTATGGAAGGAGGAGGATCCCA
ATGGGTGAACATAAACTGCATATCGGTGATCTTAAACATACTATTTTGGTTCAACCGCAACTTTAAAAGAGGCATACAAAAAGAAG
CAACAAATAAGGAAACCTTTTAACGGACTGGAGTGTTTCCTCTTATTTACATGTTACATTATATATAGAGAGATAGGTTATTTTCT
TGAGAAATTACTCAAGAAATGGTTCAATCCAACATGAGAAGCACCAAAGGGTCGCTTCTTGGATTTGTATGTTTTATTTCTTCTAC
TTTTTTCGTCATCAATGTTACTGTAACTTGTGGCTCCCAAAATAAGAAAGATATGGGGCCCTTGTAAAAAGTTGAAACTAAGAAAA
AAATGAAGATAAATGATAATTTGATATATACATTATTTCTTTGCTTTCTTGTCTC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002865732 beta-xylosidase 1 [Arabidopsis lyrata subsp. lyrata] | 3402 | 0.0 |
| NP_199747 beta-xylosidase 1 [Arabidopsis thaliana] | 3400 | 0.0 |
| AAS17751 beta xylosidase [Fragaria x ananassa] | 2717 | 7e-305 |
| XP_002519194 Periplasmic beta-glucosidase precursor, putative [Ricinus communis] | 2668 | 3e-299 |
| BAG28345 arabinofuranosidase [Citrus unshiu] | 2665 | 7e-299 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FGY1 Beta-D-xylosidase 1 | 3400 | 0.0 |
| Q94KD8 Probable beta-D-xylosidase 2 | 2470 | 1e-277 |
| Q9FLG1 Beta-D-xylosidase 4 | 2095 | 4e-234 |
| A5JTQ3 Beta-xylosidase/alpha-L-arabinofuranosidase 2 | 2057 | 1e-229 |
| A5JTQ2 Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) | 2014 | 9e-225 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6RXY3 Beta xylosidase | 2717 | 5e-305 |
| B9HIR4 Predicted protein (Fragment) | 2694 | 2e-302 |
| B9RZM5 Periplasmic beta-glucosidase, putative | 2679 | 1e-300 |
| B2DD06 Arabinofuranosidase | 2676 | 3e-300 |
| B9HWX2 Predicted protein | 2671 | 1e-299 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G49360.1 BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds | 3401 | 0.0 |
| AT1G02640.1 BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds | 2470 | 1e-278 |
| AT5G64570.1 XYL4; hydrolase, hydrolyzing O-glycosyl compounds / xylan 1,4-beta-xylosidase | 2095 | 3e-235 |
| AT5G09730.1 BXL3 (beta-xylosidase 3); hydrolase, hydrolyzing O-glycosyl compounds | 1979 | 9e-222 |
| AT3G19620.1 glycosyl hydrolase family 3 protein | 1920 | 6e-215 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
