Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN09602

FASTA Sequence
Unigene ID: UN09602Length: 1527  SNP
CATTTCTCTCTGCAAAGAAAAGCAGAAACCAAGAATGTGCGACTCAGACTTTCTCTCTCGATGTTCCTCTTACGAGGCAGACTTTG
ATTCTGACTCCGACATCTCTACCTCAAGCTCCTGCTCCACGTACAGTGAATCTGAGGAAGAGATCAACAATGACTTCGGTTATGAG
CTATCAACAAAGAAGTTGGAGAAAAAAGAGAAGAAGAAGAGCAATGTGTTGCTTGAAGGGTACGTTGAAGATTCGCTGGTGAATGA
TGATCTGAAGAGGACCAAGAGTTTAACGGACGATGACCTCGAGGAGCTTAAAGGTTGTGTAGATCTTGGTTTCGGGTTCAACTACG
AGGAGATTCCTGAGCTTTGTAATACTTTACCTGCTCTTGAGCTTTGTTACTCGATGAGTCAGAAGTTTATGGACCAAGATCATCCT
CACCATATTTCTTCGCCTGTGAAGAAGTTTAAGACGATGGTTGTGTCACACGTTAGTCCAATAGCTAGCTGGAAGATCTCTAGTCC
TGGGGACAATCCTGATGATGTCAGAGCAAGGTTGAGATTCTGGGCACAAGCAGTGGCATGCACTGTGAGACTATGCACTTGAGGAG
GATAAGAAGATGGACAACAAACACAACTCTCATGAGCTGCTCAGATATGTACAAAAAGATTTTGGTAATGAAATTTGTTGTAATTG
CATTCTTGTAAGAGAACATAAATAAAGTTCTATTCTTTTGATGAATATTGGTTACTAAGAACATTCAGTCACACAACACAAGCATA
TATCTAAAGAGAATCAGTATATAAAAGTAGCTCTTCAGTCTCCAACTCGGACATGCTCCATGCTTCTGATCTCCTTTCCTTGAATT
TTTTATGTTCACGTAGATGCCAATAGCTTCTCTATGTCCTTCTCAATCTCAAGAGGTGATGTTGTCGGAGCAAATCGATCCACGAC
ATTTCCTTGTCTGTCTACCAGAAACTTTGCGAAGTTCCACTTGATAGAATCCCCAAACAATCCACCTTTCTGTTCTTTCAAGAACT
TGTATAGAGGTGAAGCATTCTCACCATTCACTTCAATCTTGTCAAAGATGGGAAACTCTCCTTTGAAAGTTGTGCAAATGTTATCC
TTAATCTCCTTGTTGCTACCTGGCTCTTGACTTCCAAATTGGTTGCAGGGAAACGCTAAGATCTCAAGCCCCTTAGTTTTGTACTT
GGCATACAAAATGTTCAACTCTTTGTAGTTTCCTTGTGTTAGACCACACTTAGAGGCTACGTTGACAATAAGAAGCACCTTTCCAG
TGAACTTGCTTAAACTCACATCATTCCCATCAATGTCCTTAACGGAGATGTGGTAGATGGAGCTGTATGATGATTGTTCGACAATA
GCTGGAGAAGGCAGGTACCTGTACAGGTAGAACACAAAGGCTAGAGGCAATAAGAGAATCAGGACACGACTTCTTGATCTAGGCAT
CGAGACAGATTCTCTATGAATGACGATGAGGACGAACAAACAAATGTGTTCAAGTTCTAACACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL55967 phospholipid hydroperoxide glutathione peroxidase [Raphanus sativus]10095e-107
XP_002881897 ATGPX3 [Arabidopsis lyrata subsp. lyrata]8276e-086
NP_181863 putative glutathione peroxidase 3 [Arabidopsis thaliana]8132e-084
NP_850394 uncharacterized protein [Arabidopsis thaliana]7863e-081
AAB64331 unknown protein [Arabidopsis thaliana]7659e-079

Swiss-Prot top hits (Blast detail)Scoree value
O22850 Probable glutathione peroxidase 3, mitochondrial8131e-085
O48646 Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial6122e-062
Q06652 Probable phospholipid hydroperoxide glutathione peroxidase6103e-062
P30708 Probable phospholipid hydroperoxide glutathione peroxidase6086e-062
Q9FXS3 Probable phospholipid hydroperoxide glutathione peroxidase6061e-061

TrEMBL top hits (Blast detail)Scoree value
Q8W2D1 Glutathione peroxidase10093e-107
Q94JW9 At2g433407862e-081
O22849 Putative uncharacterized protein At2g433407656e-079
C6T3W7 Glutathione peroxidase7092e-072
C6T020 Glutathione peroxidase6643e-067

Arabidopsis top hits (Blast detail)Scoree value
AT2G43350.1 ATGPX3 (GLUTATHIONE PEROXIDASE 3); glutathione peroxidase8147e-087
AT2G43340.1 unknown protein7879e-084
AT4G11600.1 ATGPX6 (GLUTATHIONE PEROXIDASE 6); glutathione peroxidase6122e-063
AT4G31870.1 ATGPX7 (glutathione peroxidase 7); glutathione peroxidase5996e-062
AT2G25080.1 ATGPX1 (GLUTATHIONE PEROXIDASE 1); glutathione peroxidase5924e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  18%
 
116  55%
 
93  27%

Unigene MembersMember information