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Information for unigene UN10144

FASTA Sequence
Unigene ID: UN10144Length: 1004 SSR 
GGGGTTTTCTTCTGTTATTGATCAACTGAAAAGCGCAGAGAGAGAGAGAGAGAGAGAGAGACGAGACGAGAGATTGTGGAGGACTT
GATTGAGAAATCGGCCTCGTTCTTCGGAGACTAATCAATCTCTCTCTTTCTGTTCATCGGAATCTTTTGATATCTTGCTTTTATAG
TTGGATTGCAAAAAGGGAAGAAAGATGGGGAATATGTTCGTGAAGAAACCACAGATCACGGACGTTGATCGAGCCATTCTCTCTCT
CAAAACCCAGAGACGCAAGCTCGGCCAATACCAGCAGCAGCTTGAGAAAGTAATAGAAGCTGAGAAGCAAGCTGCAAGAGACTTAA
TCCGAGAAAATAGAAAGGAGAGGGTTTTGTTAGCACTGAGGAAGAAACGGACGCAAAAGACTTGTTGAAGCAAGTTGATCAATGGG
TCATCAATGTTGAACAGCAATTGGCAGATATTGAACTTACGAGCAAGCAAAAGGCCGTGTTTGAGAGCTTAAAGCAGGGTAGCAGT
GCTATTAAAGCCATTCAAAGCGAAGTGGATCTTGATGATGTTCAAAAGCTTATGGATGATACCGCTGATGCTAAAGCCTATCAAGA
TGAGTTGAATGCTATTTTGGGAGAGAAACTATCAGCAGAGGATGAAGAAGAGATATTAGCAGAATTTGACAACCTAGAAAGTCAGC
TTGCTGTTGATGAGATGCCTGATGTGCCTACAACGGAGCCCCAAGAATCTGAGAAGATAGATCTTCCAGATGTGCCAACGAGAAAC
CCATCGCTTCCATGCTGAATCACACCAGCTGAATCAGCCACAAAGAGAAAAGTTCTCGAAGAACCTTTGCCAGCTTGAGCTAGAAG
AAACTAGTCAACAAAACGAGATTATATCATTCTTTTAGCACTTCTCTTTTAATGCTCTTGAAGTTTTACTGTACAATCTTTAAGTC
TCTTGTTGTAAAGAACAAAGATTTGTGGGATCCCACTGTGTGAAAGGATTCAAATTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568980 vacuolar protein sorting-associated protein 20-1 [Arabidopsis thaliana]6402e-064
XP_002864873 SNF7 family protein [Arabidopsis lyrata subsp. lyrata]6383e-064
AAM62458 unknown [Arabidopsis thaliana]6373e-064
BAH20247 AT5G63880 [Arabidopsis thaliana]6042e-060
BAB11036 unnamed protein product [Arabidopsis thaliana]6007e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q8GXN6 Vacuolar protein sorting-associated protein 20 homolog 16407e-066
Q9FY89 Vacuolar protein sorting-associated protein 20 homolog 25725e-058
Q54KZ4 Charged multivesicular body protein 62302e-018
Q503V0 Charged multivesicular body protein 61872e-013
Q6GMA4 Charged multivesicular body protein 6-A1712e-011

TrEMBL top hits (Blast detail)Scoree value
B9DHN0 AT5G63880 protein (Fragment)6042e-060
B9HEZ5 Predicted protein5557e-055
B9H4L4 Predicted protein5531e-054
C6TE32 Putative uncharacterized protein5064e-049
C6TEQ1 Putative uncharacterized protein5021e-048

Arabidopsis top hits (Blast detail)Scoree value
AT5G63880.1 VPS20.16415e-067
AT5G09260.1 VPS20.2 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2)5762e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  50%
 
201  25%
 
181  25%

Unigene MembersMember information