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Information for unigene UN10209
FASTA Sequence |
Unigene ID: UN10209 | Length: 1233 |
SSR | | GGAGAGAGAGAGAGAGAGAGAGAGAATGAAGGCGATCGTGATCACGGAGCCAGGAGCGCCGGAGGTTCTGCAACTCCGAGAAGTGG
AAGACCCGGAAGTGAAAGAAGACGAGGTTCTCATCAGAGTTCACGCCACTGCTCTGAATCGCGCAGATACACTCCAGAGACTGGGC
TCTTACTCTCCACCACCTGGCTCTAGCCCTTACCCTGGTCTCGAGTGTTCCGGTACCATCGAATCCCTCGGAAACTCCGTCTTCTC
TCGTTGGAAGGTCGGAGACCAGGTGTGTGCTCTTCTTTCTGGAGGAGGTTATGCGGAGAAGGTTGCTGTACCCGTTGGACAAATCC
TTCCAGTCCCTGCTGGTATCTGTCTGAAAGATGCAGCTGCTTTCCCTGAAGTGGCTTGCACTGTTTGGTCTACTGTCTTCATGATG
GGCCGTCTCTCCCCTGGTGAATCCTTCTTGGTTCATGGAGGTTCAAGTGGGATTGGGACATTTGCGATTCAGATGGCTAAACATCA
AGGAGTCAGAGTATTTGTCACAGCAGGAAATGAGGAAAAGCTAGCTGCTTGCAAAGAACTCGGGGCTGATGTTTGTATAAATTACA
AAACCGAGGACTTTGTTGCAAAGGTGAAAGCTGAAACAGATGGGAAAGGTGTGGATGTTATCTTGGACTGCATTGGAGCGCCTTAT
TTGCAGAAAAACCTCGACAGCTTAAACTTCGATGGAAGGTTATGTATCATCGGTTTAATGGGAGGAGCTAATGCAGAGATAAAACT
AAGTAGTCTGCTCCCGAAGCGTCTCACTGTCTTAGGAGCTGCGTTAAGACCAAGAAGCAAGGAGAACAAAGCGGTTGTTGTAGCGG
AAGTGGAGAAGATTGTTTGGCCAGCGATAGAAGCAGGGAAGGTAAAACCGGTGATTTACAAGTACTTACCATTGTCGCAAGCAGCA
GAAGCTCATAGTCTTATGGAGAGTAGTAGCCATATTGGTAAGGTTCTGCTTGTGACTTGATTCTCTTGCAAAGGGAGAAAGAAAAT
GTTCAGGAGACACGAATCATGGTGGGAAAATAATAAAATTTGGTGGATTGTGTTCATAGATGTATTAAGAGGTCTGTTTGTTCACT
GGCTTTTATGTAATCTCTATGTTTGGGACTATGTAACTATGGAATATCAATAAGCTGTCAACACTAAAGTATTATGTTTACTTCTT
CATATTGTACTAAATATATTATGTTGTAC
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GenBank top hits (Blast detail) | Score | e value |
AAY18430 putative quinone oxidoreductase [Noccaea caerulescens] | 1521 | 1e-166 |
XP_002869882 oxidoreductase [Arabidopsis lyrata subsp. lyrata] | 1504 | 1e-164 |
NP_193889 putative NADPH quinone oxidoreductase [Arabidopsis thaliana] | 1494 | 2e-163 |
NP_001031691 putative NADPH quinone oxidoreductase [Arabidopsis thaliana] | 1331 | 2e-144 |
XP_002305665 predicted protein [Populus trichocarpa] | 1323 | 1e-143 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q53FA7 Quinone oxidoreductase PIG3 | 643 | 4e-066 |
Q6AYT0 Quinone oxidoreductase | 432 | 1e-041 |
P47199 Quinone oxidoreductase | 418 | 5e-040 |
P11415 Quinone oxidoreductase | 410 | 4e-039 |
Q08257 Quinone oxidoreductase | 397 | 1e-037 |
TrEMBL top hits (Blast detail) | Score | e value |
Q2KKB7 Putative quinone oxidoreductase | 1521 | 1e-166 |
O65423 AT4g21580/F18E5_200 | 1494 | 1e-163 |
Q2V3G2 AT4G21580 protein | 1331 | 1e-144 |
B9H236 Predicted protein | 1323 | 9e-144 |
B9S608 Quinone oxidoreductase, putative | 1300 | 4e-141 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G21580.1 oxidoreductase, zinc-binding dehydrogenase family protein | 1500 | 1e-166 |
AT4G21580.3 oxidoreductase, zinc-binding dehydrogenase family protein | 1460 | 6e-162 |
AT4G21580.2 oxidoreductase, zinc-binding dehydrogenase family protein | 1332 | 4e-147 |
AT5G61510.1 NADP-dependent oxidoreductase, putative | 386 | 2e-037 |
AT3G56460.1 oxidoreductase, zinc-binding dehydrogenase family protein | 306 | 4e-028 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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