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Information for unigene UN10422
FASTA Sequence |
Unigene ID: UN10422 | Length: 854 |
| SNP | GACAGAAAAAAGTAATTGCTGACTTGTCTTTAATAGATAATAAATCTCACAAAGGAAGGAAAACCATAACAAAACATCAAACAGCT
TACATCTCAGATGTATTTGTCAAACAGAGTTTATTCATAATACTTCCTAGACTTAACCCTTCAGAGATTATACCATAGGTTGCACG
TAGTCTTCTCTTACACATCTCCTGTTTGTACCATCATATACACGTCATGGTATAAAAACATCAGCAGAGGAAAATCAAGCCTGCGC
GGTTTCTCCAGCTGCTGCTACTGCTGCAGCACCGTTTGTTTTCACTCGCTTCTCCTTGTAGTCTTTCACAGCTGCCTTGATGGCGT
CCTCGGCTAGCATACTGCAATGGAGCTTCACTGGTGGGAGAGAAAGATGCTTGGCGATTTCGGTGTTCTTGATGGTCAGAACTTCC
TCCATAGCTTTGCCTTTCACCCATTCAGTGGCGACAGACGAAGACGCGATAGCGGAGCCACAGCCAAAGGTCTTGAAACGAGCATC
GACGATCTGACCGGTCTTCTCATCGACCTTGATCTGCAGCTTCATCACATCACCGCACGCGGGAGCTCCGACGAGACCCGTGCCGA
TGCTGGGATCGTTCTTGTCGAAAGACCCGACGTTGCGGGGGTTATCGTAGTGGTCGATGACGTTCTCGTGGTAGGATCGGAAGATA
CCGACGGACCACGGGGTCGATTGGCGCGACGTAAGGCCTAGAGCGTTCTTCGCGGCTTGCCTGAGCATCATCGTCGTCGATTAGGG
TTTGAGAGAGAGACGGGTTGTTTCCGTGGATGTTGGAGAGATGAGATTGGAAGTTTAGGAGGGGTCCTTTTCTTTATTCC
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GenBank top hits (Blast detail) | Score | e value |
XP_002867782 iron-sulfur cluster assembly complex protein [Arabidopsis lyrata subsp. lyrata] | 811 | 2e-084 |
NP_193953 SufE/NifU family protein [Arabidopsis thaliana] | 805 | 8e-084 |
AAM66114 nifU-like protein [Arabidopsis thaliana] | 800 | 3e-083 |
XP_002511390 nitrogen fixation protein nifu, putative [Ricinus communis] | 649 | 1e-065 |
ACI47519 iron-sulfer cluster scaffold protein ISU1 [Eucalyptus grandis] | 635 | 4e-064 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9H1K1 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial | 532 | 2e-053 |
Q9D7P6 Iron-sulfur cluster assembly enzyme ISCU, mitochondrial | 528 | 5e-053 |
Q6BGU0 Iron sulfur cluster assembly protein 1, mitochondrial | 500 | 9e-050 |
Q6CRQ9 Iron sulfur cluster assembly protein 1, mitochondrial | 500 | 9e-050 |
Q6FJY3 Iron sulfur cluster assembly protein 1, mitochondrial | 494 | 4e-049 |
TrEMBL top hits (Blast detail) | Score | e value |
O49627 AT4g22220/T10I14_50 | 805 | 6e-084 |
Q8L984 NifU-like protein | 800 | 2e-083 |
B9RB15 Nitrogen fixation protein nifu, putative | 649 | 7e-066 |
B8R1J5 Iron-sulfer cluster scaffold protein ISU1 | 635 | 3e-064 |
C6T2J7 Putative uncharacterized protein | 629 | 2e-063 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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