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Information for unigene UN10451
| FASTA Sequence |
| Unigene ID: UN10451 | Length: 1016 |
| SNP | GGAAACACACTCGATCGATCTATCTAATCTTCATCCTCGTGATCATCGTTGAGAAAGATGGCCAGAAAGTTCTTCGTCGGAGGCAA
CTGGAAATGCAACGGAACTGGTGAGGAGGTGAAGAAGATTGTCAATACTCTTAACGAAGCTCAAGTTCCTTCCCAGGATCTCGTTG
AGGTTGTCGTTAGCCCTCCATATGTGTTCCTTCCTCTGGTTAAGAGCATATTGAGGCCTGACTTCCATGTTGCGGCACAAAACTGC
TGGGTCAAGAAAGGAGGTGCCTTCACTGGTGAAGTTAGTGCTGAGATGCTTGTGAACTTGGACATCCCATGGGTTATCCTTGGTCA
CTCTGAAAGGAGAGCACTCCTCAATGAAACAAACGAGTTTGTTGGAGACAAGGTTGCCTATGCTCTTGCTCAAGGTTTGAAAGTGA
TTGCTTGTGTTGGCGAGACTCTTGAGCAGCGGGAGGCTGGGTCGACCATGGATGTTGTGGCTGCCCAGACTAAAGCTATTGCTGAC
CGGGTGTCGAACTGGTCAAATGTTGTCGTAGCCTATGAACCAGTGTGGGCCATTGGAACCGGAAAGGTCGCTAGCCCAGCCCAAGC
TCAAGAAGTACATGATGAGCTGAGGAAATGGCTTGCAAAGAACGTGAGCGCTGATGTCGCTGCTGCAACCCGCATCATTTATGGAG
GATCCGTCAATGGTGGTAACTGCAAGGAGCTAGGTGGTCAGGCCGATGTTGATGGTTTCTTGGTCGGTGGTGCTTCTCTAAAGCCC
GAGTTTATCGACATCATCAAGGCTGCTGAGGTGAAGAAAAGCGCTTAGTGGCTTCACGAAACAATCTCAAATCCTTTTGCTTCTTC
AGTCTCAACTCTGATCGAAAAAATGAATAAGTTGATACAGTGTTATTGTGATACTCTTTTGCTTCAGTTGTATGTTGTCTTGAGGA
GGCAACACACTTTTTCTTGGCCGTTTTGTTTAGCTCTGAAATCACAAAATCTCACCCTTTTCTAATCTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876302 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1259 | 3e-136 |
| NP_191104 triosephosphate isomerase [Arabidopsis thaliana] | 1251 | 2e-135 |
| AAA03449 cytosolic triose phosphate isomerase [Arabidopsis thaliana] | 1246 | 8e-135 |
| P48495 RecName: Full=Triosephosphate isomerase, cytosolic; Short=TIM; Short=Triose-phosphate isomerase | 1179 | 5e-127 |
| ABK92459 unknown [Populus trichocarpa] | 1156 | 2e-124 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48491 Triosephosphate isomerase, cytosolic | 1251 | 1e-136 |
| P48495 Triosephosphate isomerase, cytosolic | 1179 | 2e-128 |
| P21820 Triosephosphate isomerase, cytosolic | 1129 | 1e-122 |
| P12863 Triosephosphate isomerase, cytosolic | 1087 | 1e-117 |
| P48494 Triosephosphate isomerase, cytosolic | 1080 | 6e-117 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P7V6 Triosephosphate isomerase | 1156 | 2e-124 |
| B9HTI4 Triosephosphate isomerase | 1156 | 2e-124 |
| Q38JI4 Triosephosphate isomerase | 1155 | 2e-124 |
| D1LWT8 Triosephosphate isomerase | 1153 | 3e-124 |
| Q6T379 Triosephosphate isomerase | 1149 | 1e-123 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G55440.1 TPI (TRIOSEPHOSPHATE ISOMERASE); triose-phosphate isomerase | 1252 | 7e-138 |
| AT2G21170.1 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 805 | 4e-086 |
| AT2G21170.2 TIM (TRIOSEPHOSPHATE ISOMERASE); catalytic/ triose-phosphate isomerase | 748 | 2e-079 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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