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Information for unigene UN10530
| FASTA Sequence |
| Unigene ID: UN10530 | Length: 1177 |
SSR | SNP | GGGACCACATCATTCACCATCATCACATCTCTCTCTCTCTCTCTCTTCAAACCAGCAATGGCTGTTTCTTCAAGTCCATGGGCTCT
CATAGCTCTGTTTCTGATGGCCTCTTCTACTGTAATGGCAATTCCTCCACGGAAGGCCATTGATGTGCCATTCGGCCGAAACTACG
TCCCAACTTGGGCTTTTGACCACCAGAAGCAACTCAATGGTGGTTCTGAACTCCAACTCATCCTCGACAAATACACTGGGACAGGG
TTTCAATCCAAAGGGTCATATTTGTTCGGACATTTCAGTATGCACATAAAGCTGCCAGCTGGTGATACCGCTGGGGTCGTCACTGC
ATTTTATCTGTCGTCGACTAACAACGAGCATGACGAGATAGACTTCGAGTTTCTCGGCAACAGGACAGGCCAGCCAGCAATATTGC
AGACGAATGTGTTTACAGGAGGAAAGGGAAACAGAGAGCAACGCATTTATCTCTGGTTCGACCCTTCAAAGGCTTATCATACTTAC
TCCATCCTCTGGAATCTCTACCAAATTGTATTCTTTGTTGACAACATACCAATCCGTGTGTTCAAGAACGCAAAGGATCTAGGAGT
ACGTTTCCCATTCAACCAACCGATGAAGCTATACTCGAGCCTTTGGAACGCTGACGATTGGGCCACAAGAGGAGGTCTAGAGAAAA
CCAATTGGGCTAATGCACCCTTCATAGCTTCCTACAGAGGATTCCACATCGACGGCTGCCAAGCTTCCGTGGAGGCCAAGTACTGT
GCTACCCAAGGCCGCATGTGGTGGGACCAGAATGAATTCCGTGACCTTGATGCCGAACAATATCGTCGTCTCAAATGGGTTCGCAT
GAAATGGACCATCTACAACTACTGTACCGACCGTACAAGGTTCCCAGTTATGCCAGCCGAATGTAAAAGGGACAGAGACGTGTGAG
TACTACTAAGGGTTTCGAACTTTCAATGGACCGGATATCATGCATCTGTTCAAAAGATTGCTATGAAATATGTATGCCTGTTGGTA
CGTTATGTTTATGCTTTGTTTGGACCTGAATTTATGTTATTATTCTATTGTTTAGCTATGTTTCTTATTAGTTCCAAAAAGAGAGC
TATGTTTCTTGTATGTTACGTGATTTATAAAACTTACAAGTCTTTTGTTGGCATCTACG
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| GenBank top hits (Blast detail) | Score | e value |
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| Q6YDN9 RecName: Full=Xyloglucan endotransglucosylase/hydrolase; AltName: Full=BobXET16A; Flags: Precursor | 1602 | 5e-176 |
| XP_002883741 endo-xyloglucan transferase [Arabidopsis lyrata subsp. lyrata] | 1564 | 1e-171 |
| NP_178708 xyloglucan endotransglucosylase/hydrolase protein 4 [Arabidopsis thaliana] | 1562 | 2e-171 |
| ADE42490 xyloglucan endotransglucosylase/hydrolase 1 [Fragaria x ananassa] | 1317 | 6e-143 |
| ACD03216 xyloglucan endotransglucosylase/hydrolase 6 [Actinidia deliciosa] | 1311 | 3e-142 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6YDN9 Xyloglucan endotransglucosylase/hydrolase | 1602 | 2e-177 |
| Q39099 Xyloglucan endotransglucosylase/hydrolase protein 4 | 1562 | 1e-172 |
| Q9XIW1 Probable xyloglucan endotransglucosylase/hydrolase protein 5 | 1302 | 1e-142 |
| Q8LNZ5 Probable xyloglucan endotransglucosylase/hydrolase protein B | 1253 | 7e-137 |
| Q41638 Xyloglucan endotransglucosylase/hydrolase protein A | 1250 | 2e-136 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D5HRN0 Xyloglucan endotransglucosylase/hydrolase 1 | 1317 | 4e-143 |
| C0IRG5 Xyloglucan endotransglucosylase/hydrolase 6 | 1311 | 2e-142 |
| C7F8A5 Xyloglucan endotransglycosylase | 1307 | 6e-142 |
| C0SSE2 Xyloglucan endotransglucosylase/hydrolase | 1304 | 1e-141 |
| D2Y4N9 Xyloglucan endotransglycosylase | 1304 | 1e-141 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G06850.1 EXGT-A1 (ENDOXYLOGLUCAN TRANSFERASE); hydrolase, acting on glycosyl bonds / xyloglucan:xyloglucosyl transferase | 1563 | 7e-174 |
| AT5G13870.1 EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds / xyloglucan:xyloglucosyl transferase | 1303 | 1e-143 |
| AT3G23730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 765 | 2e-081 |
| AT4G13090.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 758 | 2e-080 |
| AT5G65730.1 xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative | 754 | 4e-080 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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