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Information for unigene UN10621
| FASTA Sequence |
| Unigene ID: UN10621 | Length: 928 |
| SNP | GGAAACCAGTTTTACCTTTCAGTATTTAAAAAAAAAAAAAATTTGCGCAAAAGTGATAACAACAAAAAAGAAGCTCCAATAAAAAC
AAAACCAAAATGTCTCATTCCAATCTTTACGTTTACAAGCTACCAAATGCAAAACCGAAATTTCAAAGAGTAGAATCGAGACGAGT
ACAAACGCAGCAAGTATTAAACCAAAAGACAGATGCGAATTCTCAGTACTTAATCGGTGCAAGAACATCGAGCTGGGCTCCAAGTT
TCTCCTCTGCAACCTTCTCGGCCTTTGTCCTGAGCTTGATGAGCTGTTTCTTACGCTCATACACAGCCTGTGACCTCTCCTTTCTC
TTGACCTCAAGCTCCTTGATGGTGTCGTAGTGGTTCCAGCCAACCTCAGAAGAAAGACGGCCCAACAAGCAGTACTTGTGACCAGC
CTGGAGCCTCAAAACCTTGAGAGCATCAGGAATGACCATTCTCTTGACTTTGTCGTAAGGAGGAGGGACTCCTTCAAAAACCTTCA
AACGGGCAAGAGCAGCAGCTCCACGCTTGGTCTTGTGTGGAATCATCCCACGAAGGGTACGCCAGAAGATCTTGGAGGGAGCCCTG
AAGTGAATGGGACCGTGAGAAGGCTTAGTGTTCATGCGCTTCCTGAGAAACCTCATGTACTTCATCTTCTGACGAACCAGTCCACC
TGACAGACAAATCTCTTCGCATCGGACGACGACAACTCTCTGTCCGTTGAGCAACTCCTTGGCGATGATGGAAGCAAGACGCCCCA
ACATGTGGTGCCTCGCATCGACCACCACGCGCTTCGCGCATATCCCTGAACCAGACACCATCTCCTCCCTACTCGATTGATTCTCT
CGGGCTGCTTCTTCTCCCTTTCCAGCCGGTTAAAGAGAAGACTCAGTGTCGGATTATATATGACGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189127 60S ribosomal protein L13a-2 [Arabidopsis thaliana] | 1017 | 3e-108 |
| XP_002883564 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1017 | 3e-108 |
| AAL87341 putative 60S ribosomal protein [Arabidopsis thaliana] | 1016 | 3e-108 |
| XP_002865669 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 1009 | 2e-107 |
| XP_002863167 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1006 | 5e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LRX8 60S ribosomal protein L13a-2 | 1017 | 1e-109 |
| Q9SVR0 60S ribosomal protein L13a-3 | 1004 | 4e-108 |
| Q9SFU1 60S ribosomal protein L13a-1 | 1003 | 5e-108 |
| Q9FKC0 60S ribosomal protein L13a-4 | 1001 | 8e-108 |
| O49885 60S ribosomal protein L13a | 918 | 3e-098 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI8 60S ribosomal protein L13a, putative | 994 | 8e-106 |
| A9PB37 Putative uncharacterized protein | 985 | 9e-105 |
| B6VC51 60S ribosomal protein L13A | 979 | 5e-104 |
| A9PHS9 Predicted protein | 976 | 1e-103 |
| B9S526 60S ribosomal protein L13a, putative | 976 | 1e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G24830.1 60S ribosomal protein L13A (RPL13aB) | 1018 | 8e-111 |
| AT4G13170.1 60S ribosomal protein L13A (RPL13aC) | 1005 | 3e-109 |
| AT3G07110.1 60S ribosomal protein L13A (RPL13aA) | 1004 | 3e-109 |
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 1002 | 6e-109 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 1002 | 6e-109 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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