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Information for unigene UN11063

FASTA Sequence
Unigene ID: UN11063Length: 1176 SSR 
GAAAGTTGTGTCTATCTGTCTCCACGATTCACGCCTTGAGTCTTGACCCCTCCTCCTCATCATCATTTCCCCTCTCTCAACAGAGC
AATTCGTTCATCGTTGCGTTGGAGAAATCAACGAAAGAGAGAGAAGATGAGTTTTCAAGATTTAGAAGCAGGGAAAGGAGGAAGAT
CGAGGAAGATGAATGGAGGTGGTCGCCAAGATTCCACGCAAGCCGTCGCTTCCGGTATCTTCCAGATCAATACGGGTGTCTCCACC
TTTCAGCGGCTCGTTAACACGCTCGGTACTCCCAAAGATACCCCCGAGCTCCGTGATATGCTGCACAAGACACGGTTACATATTGG
TCAGCTGGTGAAGGACACTTCTGCTAAGCTTAAAGAAGCTAGTGAAACTGATCACCGAACCCGTGTCAATCCAAGTAAGAAGATTG
CAGATGCTAAGCTAGCAAAGGACTTTCAAGCTGTGTTGAAAGAGTTTCAGAAAGCTCAGCAAACTGCTGCTGGAAGAGAAACCGCT
TATGCTCCTCTCCTCCCTCCTTCTTCTCTTCCCTCTAGCTATACAGCGAGTGAAGTGGACAATATTCCTGAACAGAGGGGCACAAG
TTATGGAGTCCAAAAGGCAGGAACTTGTATTGTTAGACAACGAGATTGCATTCAACGAAGCTGTGATCGAAGAAAGAGAGCAAGGG
ATACAAGAAATCCATACTCAAATTGGGAGAGGTTAATGAAATTTTCAAAGATCTCGCGGTTTTTGTTAACGATCAAGGAGTCATGA
TTGATGATATTGGTACTCACATTGACAACTCTCGAGCTGCAACTGCTCAAGGAAAATCTCAGCTCGCTCAAGCCTCCAAAACCCAA
AGATCAAACTCATTTCTGACATGCTTGCTCTTGGTGATATTTGGCATTGTACTCCTGATCGTGATCATCGTACTCGCTGCTTGATT
TTGGAAAAAGCAAGAACAAGTCTTTCAATGCGTTCAACGAGTGAGTGCTGACTACTTTGGTATATATAAGATAAATTTGCAGACAA
AAAGCGTAGAAGTTGGGTTTTGTATTGGTTCGGTTTGAGGATTTATTGGTGAATGTAACAGAGTGCGTGTGTGTGTGTTGGTTTTC
TTTGTGGTGCAAAACTATTTGTTGCGAGATATTTGGTTTAATTTTTTTTTCAAATGAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568671 syntaxin-22 [Arabidopsis thaliana]6528e-066
XP_002863386 hypothetical protein ARALYDRAFT_494291 [Arabidopsis lyrata subsp. lyrata]6455e-065
XP_002870088 hypothetical protein ARALYDRAFT_493104 [Arabidopsis lyrata subsp. lyrata]5802e-057
NP_567537 syntaxin-23 [Arabidopsis thaliana]5783e-057
ABA46757 syntaxin-like protein [Solanum tuberosum]5783e-057

Swiss-Prot top hits (Blast detail)Scoree value
P93654 Syntaxin-226523e-067
O04378 Syntaxin-235781e-058
Q39233 Syntaxin-214113e-039
Q9C615 Putative syntaxin-242601e-021
O70439 Syntaxin-71703e-011

TrEMBL top hits (Blast detail)Scoree value
A8MS65 AT4G17730 protein5782e-057
Q3HRZ4 Syntaxin-like protein5782e-057
Q25BM0 Syntaxin, putative5773e-057
C6TA84 Putative uncharacterized protein5755e-057
Q8LJR4 Syntaxin5746e-057

Arabidopsis top hits (Blast detail)Scoree value
AT5G46860.1 VAM3; SNAP receptor6578e-069
AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor5781e-059
AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor5781e-059
AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor4113e-040
AT1G32270.1 ATSYP24; SNAP receptor/ protein binding2608e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
121  50%

Unigene MembersMember information