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Information for unigene UN11170

FASTA Sequence
Unigene ID: UN11170Length: 522 SSR 
CAACCAAAATACAATCTCAGGCCGATTTCATAAAAGGATTTAAACAAAATGTTAGCTAAAACCAAGTAAATTCAAAAGATTGAACA
TACATGAATCGGGGAAAACACTGTTTTTTTGGATAATTTGCACACAAGGATAAACTTCAAATGATCAATCGAACATCATCATCATC
ATCATCACCATCCACATAAACCAATTTTTTATCACAAATTTAAAAAAAAAGCTTGAAAACGACAATGGAGTACCCCCAAATACATA
CTTTAGTATTAAAAGGGGCAAAAATTTTCACTACTAAAAAAAAGTGCCTTCTGGAGGTTGAACAAGCTTACGGTTATGCGACGTAA
ACATCTCCTTCTTCAGCTGTGTCAGTATTGTCTCCATTGGGTAGTCCCTTTGCCAGTTCGCAAGAAGCCCAAATTTCTTAGGTTCC
ACCCCTCCTGTTTCATTGTTGACCCAAGCCATGTTGATACGTGAATGGAAACGGACAGGGGGAGGTTTTTCCGGGTAATCTTTGTC
ACAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002453723 hypothetical protein SORBIDRAFT_04g011270 [Sorghum bicolor]3492e-031
XP_002877873 predicted protein [Arabidopsis lyrata subsp. lyrata]3492e-031
XP_002309399 predicted protein [Populus trichocarpa]3483e-031
NP_850684 ubiquitin-conjugating enzyme E2 variant 1D [Arabidopsis thaliana]3473e-031
NP_566968 ubiquitin-conjugating enzyme E2 variant 1D [Arabidopsis thaliana]3473e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D3472e-032
Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C3364e-031
Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A2763e-024
Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B2522e-021
O74983 Ubiquitin-conjugating enzyme spm22262e-018

TrEMBL top hits (Blast detail)Scoree value
C5Y076 Putative uncharacterized protein Sb04g0112703491e-031
A9PCP1 Predicted protein3482e-031
B7FNB3 Putative uncharacterized protein3472e-031
B9SVZ4 Ubiquitin-conjugating enzyme, putative3472e-031
B6SK03 Putative uncharacterized protein3463e-031

Arabidopsis top hits (Blast detail)Scoree value
AT3G52560.1 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase3482e-033
AT3G52560.2 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase3482e-033
AT3G52560.3 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase3482e-033
AT2G36060.1 ubiquitin-conjugating enzyme family protein3373e-032
AT2G36060.2 ubiquitin-conjugating enzyme family protein3373e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  50%
 
101  50%

Unigene MembersMember information