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Information for unigene UN11409

FASTA Sequence
Unigene ID: UN11409Length: 1372 SSR 
GGAGGTTTGGTCTGAGATACATAAAGGAGGAGGTAGTGGCGGTGGAGATAGAAATGGAGGTAGTAATGGTCAGAACAATGCTCATA
AAGGTGGTGGTGGTGGTGGTGGTAGTAAGGCTGGTGTGATCGTCGGTGTGATCGTAGGTGTTCTTGTTTTCATCGCCATTGTTGGA
TTTGTGGTTTACAAATTTGTCGTGAAGAAGGAGCATGGGAAGTTTGGAAGGACGGATCCTGAGAAGGCCGGGAAGCTTATGGTTAG
TGATGATAAGAATGGTGGTGCATACGGGAATGGGCATGGAGTTAGCAACTTCAATGCGGTGAAGAGTCCTAGTAGTGGTGACAGTA
GTGATCGTTTCCTTGTTGAAGGTGGAAACGTTACCATCCCAATAGAGGTTCTTCGTCAAGTTACTAATAATTTCAGTGATGCTAAG
ATATTGGGAAGAGGCGGCTTTGGTGTTGTGTATGCCGGAGAACTACACGATGGGACCAAGACTGCTATTAAGAGGATGGAATCTTC
ATCGATGGGTGATAAAGGAAGGAACGAGTTTCAGGCCGAGATCGCTGTGCTCACTAAGGTCAGACATAGACATTTGGTTGCTCTGT
TGGGTTACTGTGTGAACGGGCACGAGAGATTGCTTGTCTATGAGTACATGCCTCAGGGGAATCTTGGACAACATTTGTTTGAGTAT
CAAGAACTAGGGTACTCTCCTTTGACGTGGAAACAAAGAGTGAGTATCGCTCTAGATGTCGCACGAGGTGTGGAATATCTCCATGG
CTTAGCTCAGCAGAGCTTCATCCATAGAGATTTAAAGCCTTCTAACATCCTACTTGGTGATGACATGAGGGCAAAGGTTGCTGATT
TCGGTTTGGTTAAGAATGCACCCGATGGGAAATACTCTGTTGAGACGAGATTAGCAGGCACATTCGGTTATCTAGCACCAGAATAC
GCCGCTACTGGGAGAGTAACGACGAAAGTTGATGTGTTTTCATTTGGAGTTGTTCTTATGGAGATGCTAACGGGAAGAAAAGCATT
AGACGATTCATTACCAGACGAGAAGTGTCATCTAGTCACATGGTTCAGAAGAATCCTAATCAACAAAGAAACCATCTCAAAGGAAC
TCGACCAAACCTTAGAGGCAGACGAGGAAACATTGGAGAGCATTCACAGGGTTGCTGAGCTAGCAGGACATTGCACAGCCCGGGAG
CCTCAACAGAGACCAGACATGGGCCACGCGGTGAATGTGTTAGCCCACTGGTGGAGAAGTGGAAACCGACGAGCCAGGACAAGAAG
AGAGTTTCGGGATCGATGTGGGCACATGAGTTTACCTCAGCTCTACGCAGATGGCACAAACGAGGAACATCGACGTCATTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883458 leucine-rich repeat family protein [Arabidopsis lyrata subsp. lyrata]17756e-196
NP_189017 leucine-rich repeat protein kinase-like protein [Arabidopsis thaliana]17748e-196
ACN59321 leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana]17675e-195
XP_002324686 predicted protein [Populus trichocarpa]14791e-161
CAN69461 hypothetical protein VITISV_043132 [Vitis vinifera]14754e-161

Swiss-Prot top hits (Blast detail)Scoree value
P43298 Probable receptor protein kinase TMK111722e-127
Q9FLJ8 Probable receptor-like protein kinase At5g613505782e-058
Q9SJT0 Probable receptor-like protein kinase At2g214805711e-057
Q9T020 Probable receptor-like protein kinase At4g391105655e-057
Q9FID9 Probable receptor-like protein kinase At5g389905621e-056

TrEMBL top hits (Blast detail)Scoree value
Q9LK43 Similarity to receptor protein kinase17745e-196
C0LGN6 Leucine-rich repeat receptor-like protein kinase (Fragment)17673e-195
B9IN58 Predicted protein14798e-162
A5AXB9 Putative uncharacterized protein14752e-161
B9HAX9 Predicted protein14521e-158

Arabidopsis top hits (Blast detail)Scoree value
AT3G23750.1 leucine-rich repeat family protein / protein kinase family protein17743e-198
AT1G66150.1 TMK1 (TRANSMEMBRANE KINASE 1); transmembrane receptor protein serine/threonine kinase11722e-128
AT2G01820.1 leucine-rich repeat protein kinase, putative11694e-128
AT1G24650.1 leucine-rich repeat family protein / protein kinase family protein10809e-118
AT2G20300.1 ALE2 (Abnormal Leaf Shape 2); kinase6032e-062

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  25%
 
91  25%
 
121  25%
 
61  25%

Unigene MembersMember information