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Information for unigene UN11477

FASTA Sequence
Unigene ID: UN11477Length: 886 SSR 
GCAAAACGGAAATGTCTCCGGCGAGACCCCGACGACGACGACGACGAGCTCCGTACCTTCTAACGAACACATTAAGACCGAGCCTG
CTGAGACCGAGACTTCTGATCAAGCGGCGGTGGAGAAGCAGAACAATCGGTGTGGCAAGAGGAAAGATTTCGACAAGAAGGCTAAA
GGCTCGTCAAAGAAGAACAAAAGCTCTGAAGAGAACGAGAAGCTGCCGTATGTTCATGTTAGAGCTCGACGTGGTCAAGCAACAGA
TAGTCATAGCTTAGCTGAACGAGCAAGAAGGGAGAAGATTAATGCAAGAATGAAGCTGCTACAAGAACTGGTCCCGGGCTGTGATA
AGATTCAGGGTACCGCGTTGGTGCTGGATGAAATCATTAACCATGTCCAGTCATTACAACGTCAAGTGGAGATGCTATCAATGAGA
CTTGCTTCTGTAAACCCTAGGATTGATTTCAATCTCGACACTATATTGAGTTCAGAAAACGGTTCTTTAATGGATGGGAACTTCAA
CGGTGCAGCAATGCAGCTTGCTTGGCCTCATCAAGTGATGGAGACAGAACAGTCCTATCATCACCGGCAACTGCAACAACCACCAC
CGCAACAATGGCCTTTCGATGGCTTGAACCAGCCTGTTTGGGGAAGAGAAGAGGATCAAGATCATGGTAATGACCACAACAGTTTG
ATGGTTGGTTCTGCTAGTTTGCACCCAAACCAAGTCAAAACGGAGTTGTAAGTTTGGGGGAAAACAGTAGACTATGGTGTAAATAT
ATCGTGTAAGCCTGTTTTTACATATATAATTAACAAAAATATATAATAATTAGATATTTGTTAAGAATGTATCAGTCATTTGATTC
AGAGAGACAACTGGTATATGATTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33814 unnamed protein product [Thellungiella halophila]9922e-105
NP_850745 transcription factor bHLH60 [Arabidopsis thaliana]9733e-103
AAM10949 putative bHLH transcription factor [Arabidopsis thaliana]9733e-103
XP_002879977 hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp. lyrata]6543e-066
NP_850368 transcription factor bHLH48 [Arabidopsis thaliana]6355e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZ02 Transcription factor bHLH486352e-065
Q3EAI1 Transcription factor bHLH605895e-060
Q9CAA9 Transcription factor bHLH493986e-038
Q9FJL4 Transcription factor bHLH783781e-035
Q8GY61 Transcription factor bHLH633719e-035

TrEMBL top hits (Blast detail)Scoree value
A2Q3E9 Helix-loop-helix DNA-binding6103e-061
C7SQI9 BHLH transcription factor PTF15995e-060
B9N6V6 Predicted protein5296e-052
A1YSK0 BHLHogu5242e-051
B9II37 Predicted protein4884e-047

Arabidopsis top hits (Blast detail)Scoree value
AT3G57800.2 basic helix-loop-helix (bHLH) family protein9749e-106
AT2G42300.1 basic helix-loop-helix (bHLH) family protein6352e-066
AT3G57800.1 basic helix-loop-helix (bHLH) family protein5903e-061
AT1G68920.1 basic helix-loop-helix (bHLH) family protein3986e-039
AT1G68920.2 basic helix-loop-helix (bHLH) family protein3986e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  67%
 
81  33%

Unigene MembersMember information